| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358060
GI number: 13358060
Start: 611599
End: 612732
Strand: Direct
Name: Not Available
Synonym: UU497
Alternate gene names: NA
Gene position: 611599-612732 (Clockwise)
Preceding gene: 13358057
Following gene: 13358062
Centisome position: 81.36
GC content: 23.54
Gene sequence:
>1134_bases ATGAAAAAAAACACACATAAGAAACTTTTGCCTTTAATTTCTATTTTTGTTTTAATCCCTTTGAGTTCACTTGTTGTAAT GTGTTCAAAAACTAAAACAAAAATAGTAAAAGAACAAAAGCAAATTACTGCTTCATCGTTAAGATCTACTGATATTGATT TAACATCAATTAACCTTGAAATCTATTTTGCTAAATTTGATGTTAATGATATTTTAGTTAAAAAATTCAGCATTGAATTA GAAGATGATAAGGGAAATAAGATAAATGTTGATATAAATCCCGAATATAACAAAAATTTACAAATGCTAAGTTTTAAATT AGAAAACTTAAAACCAAACACTACATATAAAATTACAAAGTTTAATATCACAGGACATGAGGTTGATCTAACTCAAATAA AAGATTCATTATTCACTACTAAAGCTGAGAATCTTTTACCTGATATCCCTAATTTACCTAATAGTGTTGGTATTGAAATT AAAGATATTAAAACTAATTCACTTAGCAATGATGCAACAAAAGTGAATGTTAATGTCAATTTAGAAATTAACCAATCAAC ATTAGAAAATCAATATGCCCGATTAGTTTATAAAAGCAATGATAATTCTTGAAAGCTATCAAATACTTTAAAAATTGCTG AAATTAAAAATAGTAATTTTGTTTTAGATGGTTTAATATCAAACCGTAAATATCTTTTTAAAGAATTAATTATTGGAAGC CAAAGTGATTTAAATTTAACTAATGCGCAAACTAAAATAACTACTAATAATGAGCTAAGTTTCACTACAGCTCCAAAACC TGTTGAAATAAAAAGTGTTTTAATTGATACAAAATTTGATAATCATCCAAGTAGTTTAATTAATTTGAAGTTTAATGATA GTGAGAATAATTTAAAAGAAAATGATATTTTAAAAATTAAATATAAAAAAGTAGGACCAAATGAAGTCATCTTTGAAAAA ACAGTTCGATTAGCTAATAATTTTGAACTATTATTTGAAATTGAAAATACAAAAAAGAATGAAAAATATGAAATCTTAAG TTTAGAATCAAACACTAAACATGGATATAATGTTGCACCAAGTATATTTAATTTTATTTCTAATGATTTACGCACTTTTG AAATCAAAGGTTAA
Upstream 100 bases:
>100_bases TACAAAATACACAAATAATGTAAGTTTTTACTATATTGAAAATATCTTTGGTTATAATTTAATTTGATAATAAATTTAAA TTTTATGATAGGTTAAAAAT
Downstream 100 bases:
>100_bases TTTGAATAAAAATCTAGTTACTCATTAAAAAAACGGCACGGCGCCGTTTTTTTTTTTTTTTTTTTGATTGGTTAATTGCT TATCTTGTAATATAAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKKNTHKKLLPLISIFVLIPLSSLVVMCSKTKTKIVKEQKQITASSLRSTDIDLTSINLEIYFAKFDVNDILVKKFSIEL EDDKGNKINVDINPEYNKNLQMLSFKLENLKPNTTYKITKFNITGHEVDLTQIKDSLFTTKAENLLPDIPNLPNSVGIEI KDIKTNSLSNDATKVNVNVNLEINQSTLENQYARLVYKSNDNSWKLSNTLKIAEIKNSNFVLDGLISNRKYLFKELIIGS QSDLNLTNAQTKITTNNELSFTTAPKPVEIKSVLIDTKFDNHPSSLINLKFNDSENNLKENDILKIKYKKVGPNEVIFEK TVRLANNFELLFEIENTKKNEKYEILSLESNTKHGYNVAPSIFNFISNDLRTFEIKG
Sequences:
>Translated_377_residues MKKNTHKKLLPLISIFVLIPLSSLVVMCSKTKTKIVKEQKQITASSLRSTDIDLTSINLEIYFAKFDVNDILVKKFSIEL EDDKGNKINVDINPEYNKNLQMLSFKLENLKPNTTYKITKFNITGHEVDLTQIKDSLFTTKAENLLPDIPNLPNSVGIEI KDIKTNSLSNDATKVNVNVNLEINQSTLENQYARLVYKSNDNS*KLSNTLKIAEIKNSNFVLDGLISNRKYLFKELIIGS QSDLNLTNAQTKITTNNELSFTTAPKPVEIKSVLIDTKFDNHPSSLINLKFNDSENNLKENDILKIKYKKVGPNEVIFEK TVRLANNFELLFEIENTKKNEKYEILSLESNTKHGYNVAPSIFNFISNDLRTFEIKG >Mature_377_residues MKKNTHKKLLPLISIFVLIPLSSLVVMCSKTKTKIVKEQKQITASSLRSTDIDLTSINLEIYFAKFDVNDILVKKFSIEL EDDKGNKINVDINPEYNKNLQMLSFKLENLKPNTTYKITKFNITGHEVDLTQIKDSLFTTKAENLLPDIPNLPNSVGIEI KDIKTNSLSNDATKVNVNVNLEINQSTLENQYARLVYKSNDNS*KLSNTLKIAEIKNSNFVLDGLISNRKYLFKELIIGS QSDLNLTNAQTKITTNNELSFTTAPKPVEIKSVLIDTKFDNHPSSLINLKFNDSENNLKENDILKIKYKKVGPNEVIFEK TVRLANNFELLFEIENTKKNEKYEILSLESNTKHGYNVAPSIFNFISNDLRTFEIKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42785; Mature: 42785
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNTHKKLLPLISIFVLIPLSSLVVMCSKTKTKIVKEQKQITASSLRSTDIDLTSINLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE IYFAKFDVNDILVKKFSIELEDDKGNKINVDINPEYNKNLQMLSFKLENLKPNTTYKITK EEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEE FNITGHEVDLTQIKDSLFTTKAENLLPDIPNLPNSVGIEIKDIKTNSLSNDATKVNVNVN EEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE LEINQSTLENQYARLVYKSNDNSKLSNTLKIAEIKNSNFVLDGLISNRKYLFKELIIGSQ EEECHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCC SDLNLTNAQTKITTNNELSFTTAPKPVEIKSVLIDTKFDNHPSSLINLKFNDSENNLKEN CCCEEECCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DILKIKYKKVGPNEVIFEKTVRLANNFELLFEIENTKKNEKYEILSLESNTKHGYNVAPS CEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHH IFNFISNDLRTFEIKG HHHHHCCCCEEEEECC >Mature Secondary Structure MKKNTHKKLLPLISIFVLIPLSSLVVMCSKTKTKIVKEQKQITASSLRSTDIDLTSINLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE IYFAKFDVNDILVKKFSIELEDDKGNKINVDINPEYNKNLQMLSFKLENLKPNTTYKITK EEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEE FNITGHEVDLTQIKDSLFTTKAENLLPDIPNLPNSVGIEIKDIKTNSLSNDATKVNVNVN EEECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE LEINQSTLENQYARLVYKSNDNSKLSNTLKIAEIKNSNFVLDGLISNRKYLFKELIIGSQ EEECHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCC SDLNLTNAQTKITTNNELSFTTAPKPVEIKSVLIDTKFDNHPSSLINLKFNDSENNLKEN CCCEEECCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DILKIKYKKVGPNEVIFEKTVRLANNFELLFEIENTKKNEKYEILSLESNTKHGYNVAPS CEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHH IFNFISNDLRTFEIKG HHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA