Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358062

GI number: 13358062

Start: 613706

End: 615397

Strand: Direct

Name: Not Available

Synonym: UU499

Alternate gene names: NA

Gene position: 613706-615397 (Clockwise)

Preceding gene: 13358060

Following gene: 13358067

Centisome position: 81.64

GC content: 18.85

Gene sequence:

>1692_bases
ATGTCTTTAATTTATCTTCTAATAGGTTTTATTTTATTATTTTTACTTATTTACTCTACTTTTGCATTATTGGACATTTG
AACACTTAGAAAATATAACACATTCCGTCAAAATTTTTTTAATTTTGATCAATTAGTCAATACAAAATTTAATGATATTT
ATACTCATACAGATAATATCTATGCACGTACAAGTAAACAAAAAATAACAATTATTAATAAATACCTAATTGCAATTAAT
AATGAATTAGATTTTCATAAAAAAAGTCTAATTAAATTACAAGATTATCTTGAAAATCATAAATTATTCTCTTATTTATC
ACTTATTAAGTTTATTAAAGCAAATGAAATTAAAATTAAAAATAATGTAGATGAATTTGTAGATTTAATTCAATCTTTTT
GAAATGATTTTATTATTATTGATCAACAAGAAAGAAAAATTGAAGATACCCATAAGAAATTAGATTTAATGTATAAAGAT
CTTATAAGTAAATATAGTATTCCAAATTTAAATTATCAAAAAGCAATTAATTGAACTACTGATTCATTTAATAATTTAAT
TGAAACTAAAATTAGTATGAATTATTCAAAGTATAATTATTTTTTAGTTCAATTAATTCATCGTATTAAAAATAAAGTTC
ATTTATTAAAAAATATCATTGTAGTTTTAAATTCAATCAAAATTATTGAAGAAGCTAATAAAAATAGCTTACAAAAAGTG
CAAGAAATCACCTTTTTGACTGATGACAAAATTAAAGAATTAAGACAATTTAACCATGATTTTAATGATTTTATTAATAA
CCAATTAGCTGATTTTATTTATAATTCAAAATTTGTTAATTTAAATAACCTTTATTTAAATAGTTATTATCAACAAGCCT
TAAATTGACTTAATATTAGTTCGCAAAACAATATTGGTGGGGCTGTTTTTGATAAATATAAAAAACGTTTTTATGATGAT
TTTAGCTTCATTAATAGCACTATTATTAAAGTAAATAATATTTTAGAAAAAATAAAGAGCACTTCAAAAAACTATCAATT
AAACCAATTAAACCAATTAATTTTAGACTTAGATCAAGCTAATCAAAAAATTATTAATTCTAAAATTGATAAAAATGATA
TCAAACAAAATATTGATTTCATTATTTCAACACAATTATTCTATGATAATTTAAAAAATTTATTGTTTTATTTAAATGAT
TTAAATGTTAAGTTAGCAAATTGGAATCACCACTGAAATACACTAGTTAAAAAAACTATCACTATTTATAATAAAAAAAT
CGAACTTGAATCTTATATTAAAAACAAAGATATATTTTTTAATTTATCTAATGAAATTTTTTTAGATGATTTCGAATATA
TTGAAAATATATTTCAAAAAATAAATGCTTCAAATAGTTTTGATCCCCAAATTTTAACCAATCATGAGTTAATTATTCAC
CAATTAAATTTAATTAATGAACGTTTTGATTATCTTATTGAATATATTAACCAAACCCAATTATGGATGCCAAAAATCTA
TGATTTGCTTTATAATAAAATAAATTATTATGGTATCAACTATGAATGAATAAAAAAAGAATTTCAAAATTTAAATTGAA
ACAATGTGCCTCAAGCATCTAAATTATTAAATGAATTTATTGATAATATTATTATTGCTGATCACGCTTTAAAACGTTTA
AAATTTAATTAA

Upstream 100 bases:

>100_bases
ATTAATATGCTATTAACTATTATAATATATTTTGTGATTTAAAAAATACAAAATTATTTGATTATAATTTAATATACACC
ATCTATAAAGGAATTTGTTA

Downstream 100 bases:

>100_bases
TAACAAAAAATACTAGCTTTAAGCTAGTATTTTTAATTTTATTTAAATGGTGGTTTCGGACAGAATCGAACTGTCGACAC
ACGGATCTTCAGTCCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSLIYLLIGFILLFLLIYSTFALLDIWTLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAIN
NELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSFWNDFIIIDQQERKIEDTHKKLDLMYKD
LISKYSIPNLNYQKAINWTTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKV
QEITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNWLNISSQNNIGGAVFDKYKKRFYDD
FSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLND
LNVKLANWNHHWNTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIH
QLNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEWIKKEFQNLNWNNVPQASKLLNEFIDNIIIADHALKRL
KFN

Sequences:

>Translated_563_residues
MSLIYLLIGFILLFLLIYSTFALLDI*TLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAIN
NELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSF*NDFIIIDQQERKIEDTHKKLDLMYKD
LISKYSIPNLNYQKAIN*TTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKV
QEITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALN*LNISSQNNIGGAVFDKYKKRFYDD
FSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLND
LNVKLANWNHH*NTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIH
QLNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYE*IKKEFQNLN*NNVPQASKLLNEFIDNIIIADHALKRL
KFN
>Mature_562_residues
SLIYLLIGFILLFLLIYSTFALLDI*TLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAINN
ELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSF*NDFIIIDQQERKIEDTHKKLDLMYKDL
ISKYSIPNLNYQKAIN*TTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQ
EITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALN*LNISSQNNIGGAVFDKYKKRFYDDF
SFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDL
NVKLANWNHH*NTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQ
LNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYE*IKKEFQNLN*NNVPQASKLLNEFIDNIIIADHALKRLK
FN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66358; Mature: 66227

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIYLLIGFILLFLLIYSTFALLDITLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHEECCCCEE
ARTSKQKITIINKYLIAINNELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKN
EECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
NVDEFVDLIQSFNDFIIIDQQERKIEDTHKKLDLMYKDLISKYSIPNLNYQKAINTTDSF
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH
NNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQEI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNLNISSQNN
HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
IGGAVFDKYKKRFYDDFSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
INSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDLNVKLANWNHHNTLVKKTITIYNK
HHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHC
KIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQLNLI
EEEHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHH
NERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEIKKEFQNLNNNVPQASKLLNEFI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHH
DNIIIADHALKRLKFN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLIYLLIGFILLFLLIYSTFALLDITLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHEECCCCEE
ARTSKQKITIINKYLIAINNELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKN
EECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
NVDEFVDLIQSFNDFIIIDQQERKIEDTHKKLDLMYKDLISKYSIPNLNYQKAINTTDSF
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH
NNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQEI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNLNISSQNN
HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
IGGAVFDKYKKRFYDDFSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
INSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDLNVKLANWNHHNTLVKKTITIYNK
HHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHC
KIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQLNLI
EEEHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHH
NERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEIKKEFQNLNNNVPQASKLLNEFI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHH
DNIIIADHALKRLKFN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA