| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358062
GI number: 13358062
Start: 613706
End: 615397
Strand: Direct
Name: Not Available
Synonym: UU499
Alternate gene names: NA
Gene position: 613706-615397 (Clockwise)
Preceding gene: 13358060
Following gene: 13358067
Centisome position: 81.64
GC content: 18.85
Gene sequence:
>1692_bases ATGTCTTTAATTTATCTTCTAATAGGTTTTATTTTATTATTTTTACTTATTTACTCTACTTTTGCATTATTGGACATTTG AACACTTAGAAAATATAACACATTCCGTCAAAATTTTTTTAATTTTGATCAATTAGTCAATACAAAATTTAATGATATTT ATACTCATACAGATAATATCTATGCACGTACAAGTAAACAAAAAATAACAATTATTAATAAATACCTAATTGCAATTAAT AATGAATTAGATTTTCATAAAAAAAGTCTAATTAAATTACAAGATTATCTTGAAAATCATAAATTATTCTCTTATTTATC ACTTATTAAGTTTATTAAAGCAAATGAAATTAAAATTAAAAATAATGTAGATGAATTTGTAGATTTAATTCAATCTTTTT GAAATGATTTTATTATTATTGATCAACAAGAAAGAAAAATTGAAGATACCCATAAGAAATTAGATTTAATGTATAAAGAT CTTATAAGTAAATATAGTATTCCAAATTTAAATTATCAAAAAGCAATTAATTGAACTACTGATTCATTTAATAATTTAAT TGAAACTAAAATTAGTATGAATTATTCAAAGTATAATTATTTTTTAGTTCAATTAATTCATCGTATTAAAAATAAAGTTC ATTTATTAAAAAATATCATTGTAGTTTTAAATTCAATCAAAATTATTGAAGAAGCTAATAAAAATAGCTTACAAAAAGTG CAAGAAATCACCTTTTTGACTGATGACAAAATTAAAGAATTAAGACAATTTAACCATGATTTTAATGATTTTATTAATAA CCAATTAGCTGATTTTATTTATAATTCAAAATTTGTTAATTTAAATAACCTTTATTTAAATAGTTATTATCAACAAGCCT TAAATTGACTTAATATTAGTTCGCAAAACAATATTGGTGGGGCTGTTTTTGATAAATATAAAAAACGTTTTTATGATGAT TTTAGCTTCATTAATAGCACTATTATTAAAGTAAATAATATTTTAGAAAAAATAAAGAGCACTTCAAAAAACTATCAATT AAACCAATTAAACCAATTAATTTTAGACTTAGATCAAGCTAATCAAAAAATTATTAATTCTAAAATTGATAAAAATGATA TCAAACAAAATATTGATTTCATTATTTCAACACAATTATTCTATGATAATTTAAAAAATTTATTGTTTTATTTAAATGAT TTAAATGTTAAGTTAGCAAATTGGAATCACCACTGAAATACACTAGTTAAAAAAACTATCACTATTTATAATAAAAAAAT CGAACTTGAATCTTATATTAAAAACAAAGATATATTTTTTAATTTATCTAATGAAATTTTTTTAGATGATTTCGAATATA TTGAAAATATATTTCAAAAAATAAATGCTTCAAATAGTTTTGATCCCCAAATTTTAACCAATCATGAGTTAATTATTCAC CAATTAAATTTAATTAATGAACGTTTTGATTATCTTATTGAATATATTAACCAAACCCAATTATGGATGCCAAAAATCTA TGATTTGCTTTATAATAAAATAAATTATTATGGTATCAACTATGAATGAATAAAAAAAGAATTTCAAAATTTAAATTGAA ACAATGTGCCTCAAGCATCTAAATTATTAAATGAATTTATTGATAATATTATTATTGCTGATCACGCTTTAAAACGTTTA AAATTTAATTAA
Upstream 100 bases:
>100_bases ATTAATATGCTATTAACTATTATAATATATTTTGTGATTTAAAAAATACAAAATTATTTGATTATAATTTAATATACACC ATCTATAAAGGAATTTGTTA
Downstream 100 bases:
>100_bases TAACAAAAAATACTAGCTTTAAGCTAGTATTTTTAATTTTATTTAAATGGTGGTTTCGGACAGAATCGAACTGTCGACAC ACGGATCTTCAGTCCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSLIYLLIGFILLFLLIYSTFALLDIWTLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAIN NELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSFWNDFIIIDQQERKIEDTHKKLDLMYKD LISKYSIPNLNYQKAINWTTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKV QEITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNWLNISSQNNIGGAVFDKYKKRFYDD FSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLND LNVKLANWNHHWNTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIH QLNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEWIKKEFQNLNWNNVPQASKLLNEFIDNIIIADHALKRL KFN
Sequences:
>Translated_563_residues MSLIYLLIGFILLFLLIYSTFALLDI*TLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAIN NELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSF*NDFIIIDQQERKIEDTHKKLDLMYKD LISKYSIPNLNYQKAIN*TTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKV QEITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALN*LNISSQNNIGGAVFDKYKKRFYDD FSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLND LNVKLANWNHH*NTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIH QLNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYE*IKKEFQNLN*NNVPQASKLLNEFIDNIIIADHALKRL KFN >Mature_562_residues SLIYLLIGFILLFLLIYSTFALLDI*TLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIYARTSKQKITIINKYLIAINN ELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKNNVDEFVDLIQSF*NDFIIIDQQERKIEDTHKKLDLMYKDL ISKYSIPNLNYQKAIN*TTDSFNNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQ EITFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALN*LNISSQNNIGGAVFDKYKKRFYDDF SFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKIINSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDL NVKLANWNHH*NTLVKKTITIYNKKIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQ LNLINERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYE*IKKEFQNLN*NNVPQASKLLNEFIDNIIIADHALKRLK FN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66358; Mature: 66227
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIYLLIGFILLFLLIYSTFALLDITLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHEECCCCEE ARTSKQKITIINKYLIAINNELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKN EECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC NVDEFVDLIQSFNDFIIIDQQERKIEDTHKKLDLMYKDLISKYSIPNLNYQKAINTTDSF CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH NNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQEI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNLNISSQNN HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCC IGGAVFDKYKKRFYDDFSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH INSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDLNVKLANWNHHNTLVKKTITIYNK HHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHC KIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQLNLI EEEHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHH NERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEIKKEFQNLNNNVPQASKLLNEFI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHH DNIIIADHALKRLKFN HHHHHHHHHHHHHCCC >Mature Secondary Structure SLIYLLIGFILLFLLIYSTFALLDITLRKYNTFRQNFFNFDQLVNTKFNDIYTHTDNIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHEECCCCEE ARTSKQKITIINKYLIAINNELDFHKKSLIKLQDYLENHKLFSYLSLIKFIKANEIKIKN EECCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC NVDEFVDLIQSFNDFIIIDQQERKIEDTHKKLDLMYKDLISKYSIPNLNYQKAINTTDSF CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH NNLIETKISMNYSKYNYFLVQLIHRIKNKVHLLKNIIVVLNSIKIIEEANKNSLQKVQEI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TFLTDDKIKELRQFNHDFNDFINNQLADFIYNSKFVNLNNLYLNSYYQQALNLNISSQNN HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCC IGGAVFDKYKKRFYDDFSFINSTIIKVNNILEKIKSTSKNYQLNQLNQLILDLDQANQKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH INSKIDKNDIKQNIDFIISTQLFYDNLKNLLFYLNDLNVKLANWNHHNTLVKKTITIYNK HHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHC KIELESYIKNKDIFFNLSNEIFLDDFEYIENIFQKINASNSFDPQILTNHELIIHQLNLI EEEHHHHHCCCCEEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHH NERFDYLIEYINQTQLWMPKIYDLLYNKINYYGINYEIKKEFQNLNNNVPQASKLLNEFI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHH DNIIIADHALKRLKFN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA