Click here to switch to the map view.

The map label for this gene is ruvA

Identifier: 13358012

GI number: 13358012

Start: 509678

End: 510265

Strand: Reverse

Name: ruvA

Synonym: UU449

Alternate gene names: 13358012

Gene position: 510265-509678 (Counterclockwise)

Preceding gene: 13358013

Following gene: 13358011

Centisome position: 67.88

GC content: 21.6

Gene sequence:

>588_bases
ATGAACTATTTAATTTTTAAAGTTATTTATGCAAATGCAAATATTGTTGTTGGCGAACATAATTTTATTGGTTATCAAAT
ACGTATCCCAAAAGATTATGAATTAGAAATTAATAAATTTTGCAAATTATATTTGTATGAATATATTAGCATAATGCCTA
ATAAAAATTTAATTATTAAAGATTTATATGGTTTTCGTACTTATAATGAACGGTTATTATTTATAGACTTGATTAGTATT
AATTCAATTGGCCCAAAAACAGCTATTAATATTCTAAAATATGATATTGATACAATTATTGATGCAATTGCTACTAAGAA
TATAGATTATTTAATAACAATTAAAGGAATTAACCAACGAAATGCTAATTTGATTTGTGATCAATTAAATTATAAATACA
TAAATAAAGTAAATGATAAAAATAACTGAGCTAAAGAATTAAGTATAGGTCTTGAAAATTTAGGATATACTAAAAAAGAT
ATTGAGTATGCTATTACTAAAGTTAAAATTAATTCTCAACAAGATATTGATATTAGTGAAATTATAAGCTCTGCAATCAA
AGAAATTTCATTGCGCCATGAAAACTAA

Upstream 100 bases:

>100_bases
TTTTAATTTTTGATTTATATAAATTTATTAAAAAAGCTAAAGTTGATAAAAAAAGATAAGAATAATTAGTTTTAACTAAT
TCTTTATTGAGGTGGTTAAA

Downstream 100 bases:

>100_bases
TTATGAGTTTCGTCCACAATATCTAAAAGATTTTATTGGTAAAGAACAATTAAAAAACAATTTAAAAGTTTATTTAACTG
CTAGTAAACGATTAGAAAAT

Product: holliday-junction binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNYLIFKVIYANANIVVGEHNFIGYQIRIPKDYELEINKFCKLYLYEYISIMPNKNLIIKDLYGFRTYNERLLFIDLISI
NSIGPKTAINILKYDIDTIIDAIATKNIDYLITIKGINQRNANLICDQLNYKYINKVNDKNNWAKELSIGLENLGYTKKD
IEYAITKVKINSQQDIDISEIISSAIKEISLRHEN

Sequences:

>Translated_195_residues
MNYLIFKVIYANANIVVGEHNFIGYQIRIPKDYELEINKFCKLYLYEYISIMPNKNLIIKDLYGFRTYNERLLFIDLISI
NSIGPKTAINILKYDIDTIIDAIATKNIDYLITIKGINQRNANLICDQLNYKYINKVNDKNN*AKELSIGLENLGYTKKD
IEYAITKVKINSQQDIDISEIISSAIKEISLRHEN
>Mature_195_residues
MNYLIFKVIYANANIVVGEHNFIGYQIRIPKDYELEINKFCKLYLYEYISIMPNKNLIIKDLYGFRTYNERLLFIDLISI
NSIGPKTAINILKYDIDTIIDAIATKNIDYLITIKGINQRNANLICDQLNYKYINKVNDKNN*AKELSIGLENLGYTKKD
IEYAITKVKINSQQDIDISEIISSAIKEISLRHEN

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR003583
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 22523; Mature: 22523

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLIFKVIYANANIVVGEHNFIGYQIRIPKDYELEINKFCKLYLYEYISIMPNKNLIIK
CCEEEEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
DLYGFRTYNERLLFIDLISINSIGPKTAINILKYDIDTIIDAIATKNIDYLITIKGINQR
EECCCEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
NANLICDQLNYKYINKVNDKNNAKELSIGLENLGYTKKDIEYAITKVKINSQQDIDISEI
CCEEEEECCCCHHHHCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCCCHHHH
ISSAIKEISLRHEN
HHHHHHHHHCCCCC
>Mature Secondary Structure
MNYLIFKVIYANANIVVGEHNFIGYQIRIPKDYELEINKFCKLYLYEYISIMPNKNLIIK
CCEEEEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
DLYGFRTYNERLLFIDLISINSIGPKTAINILKYDIDTIIDAIATKNIDYLITIKGINQR
EECCCEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
NANLICDQLNYKYINKVNDKNNAKELSIGLENLGYTKKDIEYAITKVKINSQQDIDISEI
CCEEEEECCCCHHHHCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCCCHHHH
ISSAIKEISLRHEN
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA