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The map label for this gene is hsdS-4

Identifier: 13358009

GI number: 13358009

Start: 507775

End: 508224

Strand: Direct

Name: hsdS-4

Synonym: UU446

Alternate gene names: NA

Gene position: 507775-508224 (Clockwise)

Preceding gene: 13358002

Following gene: 13358010

Centisome position: 67.55

GC content: 19.56

Gene sequence:

>450_bases
TTGATAAATTTAAATATTATAACTAGAGATAATTACTATTATGAGAAGATAGGTAATAATAAACCTAAAAAACTTGAAAA
TCTACCATTTAATATACCTAATAATTGAATTTGAGTAAAACTAAATAACATATCCAATGTCATAAGTGGATATTCTTTTA
AGTCATCAAAGTATACTAGTTCAGGTATAAGAATAATAAGAATTTCTGATTTTGATAGTAAAGAAGTTGATAATAATGAA
CCTATTTTTTATGAATATAATGAAAAATTTAATTCTTACAAAATTGAAAATAACGATATTATTTTAGTCATGACTGGCGG
TACAGTTGGAAAAAATATAATTATAAAAAAAGCTAATGATTATTATTTAAATCAAAGAGTTGCTAGAATCAGAACATTTA
ATGTAAATTATAATTATATTTATTATTTAATAAATACTACTTATATATAA

Upstream 100 bases:

>100_bases
TTAACCTTCTAAGTATTGATTTTTTACAAAATTTTCTCGATAGTTAAGCAGGGCATTGAAAATTACTTTTTAAATACTTA
AACATGCCTAACATTTCATT

Downstream 100 bases:

>100_bases
GGATTAATAAACGATTCGAAAAACTCAACTAACGACAATATTTCATTAAAAGATATAAATAATTTATTAATACCATTGCC
ACCATTAGATGAACAACAAC

Product: type I restriction enzyme S protein (fragment)

Products: NA

Alternate protein names: Type I Site-Specific Deoxyribonucleacificity Subunit; Restriction System DNA Specificity Subunit; Type I Restriction- System S Subunit; Type I Restriction Specificity Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MINLNIITRDNYYYEKIGNNKPKKLENLPFNIPNNWIWVKLNNISNVISGYSFKSSKYTSSGIRIIRISDFDSKEVDNNE
PIFYEYNEKFNSYKIENNDIILVMTGGTVGKNIIIKKANDYYLNQRVARIRTFNVNYNYIYYLINTTYI

Sequences:

>Translated_149_residues
MINLNIITRDNYYYEKIGNNKPKKLENLPFNIPNN*I*VKLNNISNVISGYSFKSSKYTSSGIRIIRISDFDSKEVDNNE
PIFYEYNEKFNSYKIENNDIILVMTGGTVGKNIIIKKANDYYLNQRVARIRTFNVNYNYIYYLINTTYI
>Mature_149_residues
MINLNIITRDNYYYEKIGNNKPKKLENLPFNIPNN*I*VKLNNISNVISGYSFKSSKYTSSGIRIIRISDFDSKEVDNNE
PIFYEYNEKFNSYKIENNDIILVMTGGTVGKNIIIKKANDYYLNQRVARIRTFNVNYNYIYYLINTTYI

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17294; Mature: 17294

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00144 ASN_GLN_ASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLNIITRDNYYYEKIGNNKPKKLENLPFNIPNNIVKLNNISNVISGYSFKSSKYTSSG
CEEEEEEECCCEEEEECCCCCCCHHCCCCCCCCCCEEEECCCHHHHCCCEECCCCCCCCC
IRIIRISDFDSKEVDNNEPIFYEYNEKFNSYKIENNDIILVMTGGTVGKNIIIKKANDYY
EEEEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEEECCCEE
LNQRVARIRTFNVNYNYIYYLINTTYI
CCCEEEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MINLNIITRDNYYYEKIGNNKPKKLENLPFNIPNNIVKLNNISNVISGYSFKSSKYTSSG
CEEEEEEECCCEEEEECCCCCCCHHCCCCCCCCCCEEEECCCHHHHCCCEECCCCCCCCC
IRIIRISDFDSKEVDNNEPIFYEYNEKFNSYKIENNDIILVMTGGTVGKNIIIKKANDYY
EEEEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEEECCCEE
LNQRVARIRTFNVNYNYIYYLINTTYI
CCCEEEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA