Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358002

GI number: 13358002

Start: 499980

End: 500231

Strand: Direct

Name: Not Available

Synonym: UU439

Alternate gene names: NA

Gene position: 499980-500231 (Clockwise)

Preceding gene: 13358000

Following gene: 13358009

Centisome position: 66.51

GC content: 28.17

Gene sequence:

>252_bases
ATGATTTATAAAGAAATTGTACGTAATATTATTAAACATCCATTAATTTTACCAGATGGAAAACACTATCATCTACACAA
AATCTTAACTTCAAAAGATGAATTACGTAAAGGCGAAGTAACTTTAGTTGCAGAAAATGGCAAAGAATATACAGTTGATT
TATCTGCCTTTGTTGATCTATTAGTTGATGGTGATTGCATCTTTGATGATAACCACTCATTAGTTGCATTATATTTTGAT
GATGCAAAATAA

Upstream 100 bases:

>100_bases
TCGTTTAAATCAAGAGGTTTTTTAAACTGTTTTATAATTAATATGTATAAACACTTATTATTTGTTTATATTATTAAAAT
TTAAAGGAGCATATTGGTTT

Downstream 100 bases:

>100_bases
TTAATAATATAAAATAAAAAATATCTACTTTAGTTTTTGTGCTAAAGTAGATTTTATTTTTAAAATAAATATAATCACTA
ATTATTTAGTAGACAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MIYKEIVRNIIKHPLILPDGKHYHLHKILTSKDELRKGEVTLVAENGKEYTVDLSAFVDLLVDGDCIFDDNHSLVALYFD
DAK

Sequences:

>Translated_83_residues
MIYKEIVRNIIKHPLILPDGKHYHLHKILTSKDELRKGEVTLVAENGKEYTVDLSAFVDLLVDGDCIFDDNHSLVALYFD
DAK
>Mature_83_residues
MIYKEIVRNIIKHPLILPDGKHYHLHKILTSKDELRKGEVTLVAENGKEYTVDLSAFVDLLVDGDCIFDDNHSLVALYFD
DAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9511; Mature: 9511

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKEIVRNIIKHPLILPDGKHYHLHKILTSKDELRKGEVTLVAENGKEYTVDLSAFVDL
CCHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEHHHHHHH
LVDGDCIFDDNHSLVALYFDDAK
HCCCCEEEECCCCEEEEEEECCC
>Mature Secondary Structure
MIYKEIVRNIIKHPLILPDGKHYHLHKILTSKDELRKGEVTLVAENGKEYTVDLSAFVDL
CCHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEHHHHHHH
LVDGDCIFDDNHSLVALYFDDAK
HCCCCEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA