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The map label for this gene is hsdS-5

Identifier: 13358010

GI number: 13358010

Start: 508300

End: 508674

Strand: Direct

Name: hsdS-5

Synonym: UU447

Alternate gene names: NA

Gene position: 508300-508674 (Clockwise)

Preceding gene: 13358009

Following gene: 13358018

Centisome position: 67.62

GC content: 23.47

Gene sequence:

>375_bases
TTGCCACCATTAGATGAACAACAACGAATAGTTGACAAAATTAATCTATTAGAATTTTTTATTAAACAATATGATGAAAT
AGAACAAAAATTATCGAAGCTTGAAAATGAATTTCCAGAAAAGCTAAAAAAATCGGTTTTACAATATGCTATGCAAGGCA
AATTAATTAAACAAGATCCAAATGATGATTCTATAAAAGATTTATTAAAACAAATTCATAAAGAAAAACAAAAATTATAC
AAAGAGGGTAAACTTAAAAAGAAGGATTTAGAAGAATCTATAATTTATAAAAGTGATGATAAGTCGTATTATGAGAATAT
AGGTAATAATGAGCCTAAAAAGCTTGAAAATCTACCATTTAATATAAATGTATAA

Upstream 100 bases:

>100_bases
TTTAATAAATACTACTTATATATAAGGATTAATAAACGATTCGAAAAACTCAACTAACGACAATATTTCATTAAAAGATA
TAAATAATTTATTAATACCA

Downstream 100 bases:

>100_bases
AGATGAAACAATACGTTTAATTGGTATCTCACTAAATAAATTAGTAAAAAAAGAAAATGTTAAAAACAATTATTTTTATT
TGATTAGTTGATTGTTTTTT

Product: type I restriction enzyme S protein (fragment)

Products: NA

Alternate protein names: Type I Site-Specific Deoxyribonuclease Chain S; Type I Restriction- System S Protein; Type I Restriction S Protein; Type I Site-Specific Deoxyribonucleacificity Subunit; Type I Restriction EcoKI Specificity Protein; Type I Restriction System S Subunit; Type I Restriction Ecocificity Protein; Type I Restriction- Specificity Protein; Restriction-

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPPLDEQQRIVDKINLLEFFIKQYDEIEQKLSKLENEFPEKLKKSVLQYAMQGKLIKQDPNDDSIKDLLKQIHKEKQKLY
KEGKLKKKDLEESIIYKSDDKSYYENIGNNEPKKLENLPFNINV

Sequences:

>Translated_124_residues
MPPLDEQQRIVDKINLLEFFIKQYDEIEQKLSKLENEFPEKLKKSVLQYAMQGKLIKQDPNDDSIKDLLKQIHKEKQKLY
KEGKLKKKDLEESIIYKSDDKSYYENIGNNEPKKLENLPFNINV
>Mature_123_residues
PPLDEQQRIVDKINLLEFFIKQYDEIEQKLSKLENEFPEKLKKSVLQYAMQGKLIKQDPNDDSIKDLLKQIHKEKQKLYK
EGKLKKKDLEESIIYKSDDKSYYENIGNNEPKKLENLPFNINV

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14815; Mature: 14684

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDEQQRIVDKINLLEFFIKQYDEIEQKLSKLENEFPEKLKKSVLQYAMQGKLIKQDP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
NDDSIKDLLKQIHKEKQKLYKEGKLKKKDLEESIIYKSDDKSYYENIGNNEPKKLENLPF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCC
NINV
CCCC
>Mature Secondary Structure 
PPLDEQQRIVDKINLLEFFIKQYDEIEQKLSKLENEFPEKLKKSVLQYAMQGKLIKQDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
NDDSIKDLLKQIHKEKQKLYKEGKLKKKDLEESIIYKSDDKSYYENIGNNEPKKLENLPF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCC
NINV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA