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Identifier: 13357930

GI number: 13357930

Start: 422797

End: 423240

Strand: Direct

Name: Not Available

Synonym: UU370

Alternate gene names: NA

Gene position: 422797-423240 (Clockwise)

Preceding gene: 13357929

Following gene: 13357931

Centisome position: 56.24

GC content: 24.55

Gene sequence:

>444_bases
ATGCGTAAATTAGCACTTGATTTAGGAACAAAATCATGTGGTTTTGCAATTAGTGATTTATTAGGAATAATTGCTAGCGG
ACTTGATAATTTTATTTATGAAGAAAATGATTTTACAGCTGTTTTAGCTAAAATTGATGAAATCATGATTAATTATCATC
ATGAAATTGACACAATTGTTTTAGGTTATCCAACTAATGTTTATGATGGATCAAAAAATGAACGAACATATTTAATCGAA
TCATTTTATGCATTATTAAAACAACACTTTTTAAACCATGAAAAAATTAAAATTGTTTATGAGGATGAACGTTTTAGCAC
TAAAATTGCAACTCAACGTTTAAAAAATAGTTGTGTTAAAGCAGCTAAAATCAAAAAAGTTAAAGATAAAATGAGTGCTG
TTGTTATTTTAGAAAGTTATTTAAGTAAAAATCATTTTAATTAA

Upstream 100 bases:

>100_bases
AATGGTAAAGGTGGGGGCAAGCCATATTTTGTTCAAGGTGGAACAAGTGAACAAGAAAAATTAGATGAGTTATTAACTGT
TGTAGATAAATGAGTTATTA

Downstream 100 bases:

>100_bases
AGAAAGGTAAGACTTATGTATAATCACAATAAAATTGAAAAAAAATGACAAAAGTATTGACTAGATAATAAGACTTTTAA
ATTTGTTGATAATCCTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVLGYPTNVYDGSKNERTYLIE
SFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKAAKIKKVKDKMSAVVILESYLSKNHFN

Sequences:

>Translated_147_residues
MRKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVLGYPTNVYDGSKNERTYLIE
SFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKAAKIKKVKDKMSAVVILESYLSKNHFN
>Mature_147_residues
MRKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVLGYPTNVYDGSKNERTYLIE
SFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKAAKIKKVKDKMSAVVILESYLSKNHFN

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_UREP2 (B1AJ09)

Other databases:

- EMBL:   CP000942
- RefSeq:   YP_001752453.1
- ProteinModelPortal:   B1AJ09
- SMR:   B1AJ09
- GeneID:   6155262
- GenomeReviews:   CP000942_GR
- KEGG:   upa:UPA3_0386
- HOGENOM:   HBG607919
- OMA:   NILIQAN
- ProtClustDB:   CLSK782820
- BioCyc:   UPAR505682:UPA3_0386-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 16842; Mature: 16842

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIV
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGYPTNVYDGSKNERTYLIESFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVK
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
AAKIKKVKDKMSAVVILESYLSKNHFN
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIV
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGYPTNVYDGSKNERTYLIESFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVK
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
AAKIKKVKDKMSAVVILESYLSKNHFN
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA