| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357910
GI number: 13357910
Start: 398814
End: 399479
Strand: Direct
Name: Not Available
Synonym: UU350
Alternate gene names: 13357910
Gene position: 398814-399479 (Clockwise)
Preceding gene: 13357909
Following gene: 13357911
Centisome position: 53.05
GC content: 23.57
Gene sequence:
>666_bases GTGAATCCGAAAACTAGAATTGCTTTTATTGCTGATTTAATTAATGACGCTCAAAATGTTGTCGATGTTGGTAGTGATCA CGCATATTTAGCTAAAATCTTATTGGTTAACAATAAAGCACAACATGTTACTAATATAGAAGTTAATCAAGGTCCATTAG AAAACGGAATCAATAATTTGACTAAAAATAATCTTTTAAAACGAACTACTAATATTTTGAATGATGGTTTCAAGGGATTA ATTTTGGAACAAACATTTGATTATTGTGTTATTGCAGGGATGGGAGCAACAAGTATAATAGAAATTTTAGAACAGAATAA AAATCAAATTAAAAATTATATTTTACAACCAAATACTCAATCATATAAAATACGTAAATATCTAAATAATCACTCATATC AAATTAAAGTTGAACACATTTTTGTTGAAAAAAAAATTTTTTATGAAATAATCATTTGTTCTAAAACTATTAATGTACCA AAATTAATAGAAAAAGATTATTATATAAGTAGCCAGATGCATAAGGATTCATTGAATTTATATTTTAAATTTTTAAAGAG ACGTTATGAATACTTAAAAGCTTTGGATATTTCGCTAGTTAGTGAAAATATAGTTAAAGAATATGAATATATAAAGGAAT TTATTAATGAAAAAAATGGATATTAA
Upstream 100 bases:
>100_bases TATTTAGGAGTTACACGCGAACGTGCACGTCAAATTGAATCAAAAGCAATTCGTAAATTAAAACATCCATCAAAAACCGC AAAACTACGTTCATTTATTG
Downstream 100 bases:
>100_bases AGCACAAGATATTTTGAATTTTTTAACTAAAAAATATGACTTATCAAAAGCTGAAGCTTGAGATAAAAATGGTTTATTTT TTGATGAACAACAAACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNPKTRIAFIADLINDAQNVVDVGSDHAYLAKILLVNNKAQHVTNIEVNQGPLENGINNLTKNNLLKRTTNILNDGFKGL ILEQTFDYCVIAGMGATSIIEILEQNKNQIKNYILQPNTQSYKIRKYLNNHSYQIKVEHIFVEKKIFYEIIICSKTINVP KLIEKDYYISSQMHKDSLNLYFKFLKRRYEYLKALDISLVSENIVKEYEYIKEFINEKNGY
Sequences:
>Translated_221_residues MNPKTRIAFIADLINDAQNVVDVGSDHAYLAKILLVNNKAQHVTNIEVNQGPLENGINNLTKNNLLKRTTNILNDGFKGL ILEQTFDYCVIAGMGATSIIEILEQNKNQIKNYILQPNTQSYKIRKYLNNHSYQIKVEHIFVEKKIFYEIIICSKTINVP KLIEKDYYISSQMHKDSLNLYFKFLKRRYEYLKALDISLVSENIVKEYEYIKEFINEKNGY >Mature_221_residues MNPKTRIAFIADLINDAQNVVDVGSDHAYLAKILLVNNKAQHVTNIEVNQGPLENGINNLTKNNLLKRTTNILNDGFKGL ILEQTFDYCVIAGMGATSIIEILEQNKNQIKNYILQPNTQSYKIRKYLNNHSYQIKVEHIFVEKKIFYEIIICSKTINVP KLIEKDYYISSQMHKDSLNLYFKFLKRRYEYLKALDISLVSENIVKEYEYIKEFINEKNGY
Specific function: Unknown
COG id: COG2384
COG function: function code R; Predicted SAM-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006901 [H]
Pfam domain/function: PF04816 DUF633 [H]
EC number: NA
Molecular weight: Translated: 25764; Mature: 25764
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKTRIAFIADLINDAQNVVDVGSDHAYLAKILLVNNKAQHVTNIEVNQGPLENGINNL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHH TKNNLLKRTTNILNDGFKGLILEQTFDYCVIAGMGATSIIEILEQNKNQIKNYILQPNTQ HHHHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC SYKIRKYLNNHSYQIKVEHIFVEKKIFYEIIICSKTINVPKLIEKDYYISSQMHKDSLNL HHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH YFKFLKRRYEYLKALDISLVSENIVKEYEYIKEFINEKNGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPKTRIAFIADLINDAQNVVDVGSDHAYLAKILLVNNKAQHVTNIEVNQGPLENGINNL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHH TKNNLLKRTTNILNDGFKGLILEQTFDYCVIAGMGATSIIEILEQNKNQIKNYILQPNTQ HHHHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC SYKIRKYLNNHSYQIKVEHIFVEKKIFYEIIICSKTINVPKLIEKDYYISSQMHKDSLNL HHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH YFKFLKRRYEYLKALDISLVSENIVKEYEYIKEFINEKNGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]