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Identifier: 13357911

GI number: 13357911

Start: 399460

End: 400248

Strand: Direct

Name: Not Available

Synonym: UU351

Alternate gene names: NA

Gene position: 399460-400248 (Clockwise)

Preceding gene: 13357910

Following gene: 13357914

Centisome position: 53.14

GC content: 22.94

Gene sequence:

>789_bases
ATGAAAAAAATGGATATTAAAGCACAAGATATTTTGAATTTTTTAACTAAAAAATATGACTTATCAAAAGCTGAAGCTTG
AGATAAAAATGGTTTATTTTTTGATGAACAACAAACAATTAATAATGTACAAATAGCATTAGATATCACAGATGATGTTG
TTAATGATGCAATATTAAATAATGCTAATTTAATTATTAGTCATCATCCATTATTTACAAATCAAGATTCAAATGATGAA
GTAAATTATTTTGTTAATATCGATTTAATTGAAAAAATTAAAAAAAATAAAATCAGCTTAATTCATTTACATACAGCATT
TGATGCATCAGCAAATGGAATGAGCATGCAAATGGCTAAACGTTTAGGCTTATTGAATCTTAAGCAAGATGAACAGAATC
CATATCTTGTTGTAGGAGAATTAAAATTAGGTGTTAGTGTTGATTACATTAGTCGGATTATTAAACAAAAATTTTTATCA
CCTATTATTAAATATAACAACGTTTTTAGACTAGAAACAAATCTTAAAAAAATTGGTATTATAGGAGGTAGTGGTTATAA
ATTTGCTGATGACGCATTTAATCGTTATCAACTAGATATGTTAATTACAAGTGATTTAAAATATCATAATTGATTAGATG
CACAAGCTAAAAAACAAAATATTATTGATATGAACCATTTGTCTGAATCAATTTTTATAGATGTAATTTATGATGAATTA
ACAAAATTTTATGGAAATGATGCAAATTTAAATAAATCTTTATCAATTATAAAAATTAACTATATTTAA

Upstream 100 bases:

>100_bases
AAATTTTTAAAGAGACGTTATGAATACTTAAAAGCTTTGGATATTTCGCTAGTTAGTGAAAATATAGTTAAAGAATATGA
ATATATAAAGGAATTTATTA

Downstream 100 bases:

>100_bases
TTAAAAAAAGCCTTTAGGGCCTTTTTTAATTAAATTTTTAAATCAAGATATGCAAGTAATTCAATAATTGCTTTTTTACG
ATATGCATAATATGTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKMDIKAQDILNFLTKKYDLSKAEAWDKNGLFFDEQQTINNVQIALDITDDVVNDAILNNANLIISHHPLFTNQDSNDE
VNYFVNIDLIEKIKKNKISLIHLHTAFDASANGMSMQMAKRLGLLNLKQDEQNPYLVVGELKLGVSVDYISRIIKQKFLS
PIIKYNNVFRLETNLKKIGIIGGSGYKFADDAFNRYQLDMLITSDLKYHNWLDAQAKKQNIIDMNHLSESIFIDVIYDEL
TKFYGNDANLNKSLSIIKINYI

Sequences:

>Translated_262_residues
MKKMDIKAQDILNFLTKKYDLSKAEA*DKNGLFFDEQQTINNVQIALDITDDVVNDAILNNANLIISHHPLFTNQDSNDE
VNYFVNIDLIEKIKKNKISLIHLHTAFDASANGMSMQMAKRLGLLNLKQDEQNPYLVVGELKLGVSVDYISRIIKQKFLS
PIIKYNNVFRLETNLKKIGIIGGSGYKFADDAFNRYQLDMLITSDLKYHN*LDAQAKKQNIIDMNHLSESIFIDVIYDEL
TKFYGNDANLNKSLSIIKINYI
>Mature_262_residues
MKKMDIKAQDILNFLTKKYDLSKAEA*DKNGLFFDEQQTINNVQIALDITDDVVNDAILNNANLIISHHPLFTNQDSNDE
VNYFVNIDLIEKIKKNKISLIHLHTAFDASANGMSMQMAKRLGLLNLKQDEQNPYLVVGELKLGVSVDYISRIIKQKFLS
PIIKYNNVFRLETNLKKIGIIGGSGYKFADDAFNRYQLDMLITSDLKYHN*LDAQAKKQNIIDMNHLSESIFIDVIYDEL
TKFYGNDANLNKSLSIIKINYI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 29708; Mature: 29708

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMDIKAQDILNFLTKKYDLSKAEADKNGLFFDEQQTINNVQIALDITDDVVNDAILNN
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCEEEEEEEECHHHHHHHHHCC
ANLIISHHPLFTNQDSNDEVNYFVNIDLIEKIKKNKISLIHLHTAFDASANGMSMQMAKR
CEEEEEECCEECCCCCCCCEEEEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHH
LGLLNLKQDEQNPYLVVGELKLGVSVDYISRIIKQKFLSPIIKYNNVFRLETNLKKIGII
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEE
GGSGYKFADDAFNRYQLDMLITSDLKYHNLDAQAKKQNIIDMNHLSESIFIDVIYDELTK
CCCCCCCCCCCCCEEEEEEEEECCCEECCCCCHHHHCCCEEHHHCCHHHEEHHHHHHHHH
FYGNDANLNKSLSIIKINYI
HHCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKMDIKAQDILNFLTKKYDLSKAEADKNGLFFDEQQTINNVQIALDITDDVVNDAILNN
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCEEEEEEEECHHHHHHHHHCC
ANLIISHHPLFTNQDSNDEVNYFVNIDLIEKIKKNKISLIHLHTAFDASANGMSMQMAKR
CEEEEEECCEECCCCCCCCEEEEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHH
LGLLNLKQDEQNPYLVVGELKLGVSVDYISRIIKQKFLSPIIKYNNVFRLETNLKKIGII
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEE
GGSGYKFADDAFNRYQLDMLITSDLKYHNLDAQAKKQNIIDMNHLSESIFIDVIYDELTK
CCCCCCCCCCCCCEEEEEEEEECCCEECCCCCHHHHCCCEEHHHCCHHHEEHHHHHHHHH
FYGNDANLNKSLSIIKINYI
HHCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]