Definition Borrelia burgdorferi B31 plasmid lp28-2, complete sequence.
Accession NC_001852
Length 29,766

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The map label for this gene is 11496672

Identifier: 11496672

GI number: 11496672

Start: 24489

End: 25955

Strand: Direct

Name: 11496672

Synonym: BBG29

Alternate gene names: NA

Gene position: 24489-25955 (Clockwise)

Preceding gene: 11496692

Following gene: 11496695

Centisome position: 82.27

GC content: 33.4

Gene sequence:

>1467_bases
ATGAATAAAATATTATTAAATAATGCTAGACTTAGTAAAGTGTTATTACATGAATTGCTTACCAAATTGGTAGCTTTAAA
CAGTAAAAAAGAACACTGTCCTAACACGATTAAAGTGTCTCAAGTTGAATCACTGATCAAAAAAATGAGATCAAACCAAT
ACGATAGGCTTTTAAAGGTTTATTGGGTGATTGATGTCAAAAATCAAAATTACAAAAACTCTTGTGGAGTTGATCGTTAT
TCGGCGTGCGATATTTATAGACTGGTTGCTGATCTGCTCAAAAAAGATGGCAAAAAGGTTGTTAGTGTGCGCACTGTGCA
GCGGGATCTTAAACTGCTTAACGAAATTGGCTTGATTAAAACTAAGTTAAGAAAGTTCGGTAATAAGGACAACAAAGGAA
AAGGAAGCATTGCTCATTATATACAAAATACTGAGCTTGTAGCTTATCATAAGGAAATAATTTGGGAACATCTTGTTCAA
TTACTTTATGAAAAGCTTGAGAATAAAAAAATAGTTGGTGATTTTGACGAAGACATCAAAAATGCGGTGTTTAATGTTTC
TAAGACTGCTAAATTTTATAATGCTAACAATCCATTAAAGGATCTTTCCGATACGTCCAATGGGGCCTCTAATTTCTCTA
ACAATTTTTCAGATAAATTTTCTAGACATTCAGAAAGATTATCTGAAAATATTTTTTTGAAATCTTCATGCGACACTGTC
TTAACTAATCAGGATGTTGACAGTCGCACCACAATGTCGCGCCACTCGCCACCGGCTGTATTTAATAAAGCTAATATAAG
CTATAGTAATTATAAGAATTCAAAGAATTCTTTATGTAATTCAAAAATTCAAAAAAACAATATTAATTTTGAAAAAAAAG
ATATTGAGACTAAATTGATCGAAAGGAATATCCCAAAGGATTTTCTTAGTCGCATAAAAGATCTTAGCAATAATCCTACA
ACTTACAAAAATGCACTGTATAATCTGGATAAGGCCTTAGACGAGCACAATGAGAGTAATTTGAAGTATGTGCTTGAACA
CTTTTTGGATCAGTTTTCTATTTATCGATATAAAGTTTGGATGATGATGAAGCGTAGGGATGGGGTTATTAGCGATTATG
AGGTCATTTGGAAGGAAAGGTTTGGGGAGTTTGTTAAGAAAAAAGTTGAGCTTAATGATTATGTGAAAAAAGTGCTTTCA
ATGGAGGCTAGAGAAAGAGAACAGCGTAGTAGAGAGCGTTTGGAGAGGATTAATGGTCAATCGCAAGCACAAGTGCAAAC
GCAAACAGGAGAATTGTCAAATAATCAGGAGCAAGATAGCGTAAATACGCCGCCGGAGAGAATTTACTTAGGGGAGAATA
GAAATAACATCTATGGAAGAAGTAACATCGTTAAGGATTCCTTGGGCTTTAAGACAATTAAAGGAATTACTCTTGAAAGC
CTTGGAATTGATAAAAAAGCAATTTAA

Upstream 100 bases:

>100_bases
AATTTTAAAGGAAAATAAAGTTTAAGTCGCGCTGCATGCAGCGCGACTTAAGCCTCGGACACAAAATAAAGTTTATGTGT
AAGAGGATATGTAAACATAT

Downstream 100 bases:

>100_bases
GCCTAGGTGGCTTTAGGAGGTAAAATGAGAATAAGAATGAAACATTTAGTAAGAAGGCTTTACTTAAGAAGGGACAAGAT
TTGGCATGTTTACAGAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY
SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ
LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV
LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT
TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS
MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES
LGIDKKAI

Sequences:

>Translated_488_residues
MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY
SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ
LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV
LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT
TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS
MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES
LGIDKKAI
>Mature_488_residues
MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY
SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ
LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV
LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT
TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS
MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES
LGIDKKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56725; Mature: 56725

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKV
CCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHCCHHHHHEEE
YWVIDVKNQNYKNSCGVDRYSACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIK
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQLLYEKLENKKIVGDFDEDIK
HHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCEEEECCCCHH
LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLI
HCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ERNIPKDFLSRIKDLSNNPTTYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVW
HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLSMEAREREQRSRERLERINGQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES
CHHEEEHHCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHCCCHHHCCCCHHH
LGIDKKAI
CCCCCCCC
>Mature Secondary Structure
MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKV
CCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHCCHHHHHEEE
YWVIDVKNQNYKNSCGVDRYSACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIK
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQLLYEKLENKKIVGDFDEDIK
HHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCEEEECCCCHH
LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLI
HCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ERNIPKDFLSRIKDLSNNPTTYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVW
HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLSMEAREREQRSRERLERINGQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES
CHHEEEHHCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHCCCHHHCCCCHHH
LGIDKKAI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA