Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496672
Identifier: 11496672
GI number: 11496672
Start: 24489
End: 25955
Strand: Direct
Name: 11496672
Synonym: BBG29
Alternate gene names: NA
Gene position: 24489-25955 (Clockwise)
Preceding gene: 11496692
Following gene: 11496695
Centisome position: 82.27
GC content: 33.4
Gene sequence:
>1467_bases ATGAATAAAATATTATTAAATAATGCTAGACTTAGTAAAGTGTTATTACATGAATTGCTTACCAAATTGGTAGCTTTAAA CAGTAAAAAAGAACACTGTCCTAACACGATTAAAGTGTCTCAAGTTGAATCACTGATCAAAAAAATGAGATCAAACCAAT ACGATAGGCTTTTAAAGGTTTATTGGGTGATTGATGTCAAAAATCAAAATTACAAAAACTCTTGTGGAGTTGATCGTTAT TCGGCGTGCGATATTTATAGACTGGTTGCTGATCTGCTCAAAAAAGATGGCAAAAAGGTTGTTAGTGTGCGCACTGTGCA GCGGGATCTTAAACTGCTTAACGAAATTGGCTTGATTAAAACTAAGTTAAGAAAGTTCGGTAATAAGGACAACAAAGGAA AAGGAAGCATTGCTCATTATATACAAAATACTGAGCTTGTAGCTTATCATAAGGAAATAATTTGGGAACATCTTGTTCAA TTACTTTATGAAAAGCTTGAGAATAAAAAAATAGTTGGTGATTTTGACGAAGACATCAAAAATGCGGTGTTTAATGTTTC TAAGACTGCTAAATTTTATAATGCTAACAATCCATTAAAGGATCTTTCCGATACGTCCAATGGGGCCTCTAATTTCTCTA ACAATTTTTCAGATAAATTTTCTAGACATTCAGAAAGATTATCTGAAAATATTTTTTTGAAATCTTCATGCGACACTGTC TTAACTAATCAGGATGTTGACAGTCGCACCACAATGTCGCGCCACTCGCCACCGGCTGTATTTAATAAAGCTAATATAAG CTATAGTAATTATAAGAATTCAAAGAATTCTTTATGTAATTCAAAAATTCAAAAAAACAATATTAATTTTGAAAAAAAAG ATATTGAGACTAAATTGATCGAAAGGAATATCCCAAAGGATTTTCTTAGTCGCATAAAAGATCTTAGCAATAATCCTACA ACTTACAAAAATGCACTGTATAATCTGGATAAGGCCTTAGACGAGCACAATGAGAGTAATTTGAAGTATGTGCTTGAACA CTTTTTGGATCAGTTTTCTATTTATCGATATAAAGTTTGGATGATGATGAAGCGTAGGGATGGGGTTATTAGCGATTATG AGGTCATTTGGAAGGAAAGGTTTGGGGAGTTTGTTAAGAAAAAAGTTGAGCTTAATGATTATGTGAAAAAAGTGCTTTCA ATGGAGGCTAGAGAAAGAGAACAGCGTAGTAGAGAGCGTTTGGAGAGGATTAATGGTCAATCGCAAGCACAAGTGCAAAC GCAAACAGGAGAATTGTCAAATAATCAGGAGCAAGATAGCGTAAATACGCCGCCGGAGAGAATTTACTTAGGGGAGAATA GAAATAACATCTATGGAAGAAGTAACATCGTTAAGGATTCCTTGGGCTTTAAGACAATTAAAGGAATTACTCTTGAAAGC CTTGGAATTGATAAAAAAGCAATTTAA
Upstream 100 bases:
>100_bases AATTTTAAAGGAAAATAAAGTTTAAGTCGCGCTGCATGCAGCGCGACTTAAGCCTCGGACACAAAATAAAGTTTATGTGT AAGAGGATATGTAAACATAT
Downstream 100 bases:
>100_bases GCCTAGGTGGCTTTAGGAGGTAAAATGAGAATAAGAATGAAACATTTAGTAAGAAGGCTTTACTTAAGAAGGGACAAGAT TTGGCATGTTTACAGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES LGIDKKAI
Sequences:
>Translated_488_residues MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES LGIDKKAI >Mature_488_residues MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKVYWVIDVKNQNYKNSCGVDRY SACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIKTKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQ LLYEKLENKKIVGDFDEDIKNAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLIERNIPKDFLSRIKDLSNNPT TYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVWMMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLS MEAREREQRSRERLERINGQSQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES LGIDKKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56725; Mature: 56725
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKV CCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHCCHHHHHEEE YWVIDVKNQNYKNSCGVDRYSACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIK EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQLLYEKLENKKIVGDFDEDIK HHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCEEEECCCCHH LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLI HCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ERNIPKDFLSRIKDLSNNPTTYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVW HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLSMEAREREQRSRERLERINGQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES CHHEEEHHCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHCCCHHHCCCCHHH LGIDKKAI CCCCCCCC >Mature Secondary Structure MNKILLNNARLSKVLLHELLTKLVALNSKKEHCPNTIKVSQVESLIKKMRSNQYDRLLKV CCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHCCHHHHHEEE YWVIDVKNQNYKNSCGVDRYSACDIYRLVADLLKKDGKKVVSVRTVQRDLKLLNEIGLIK EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TKLRKFGNKDNKGKGSIAHYIQNTELVAYHKEIIWEHLVQLLYEKLENKKIVGDFDEDIK HHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NAVFNVSKTAKFYNANNPLKDLSDTSNGASNFSNNFSDKFSRHSERLSENIFLKSSCDTV HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCEEEECCCCHH LTNQDVDSRTTMSRHSPPAVFNKANISYSNYKNSKNSLCNSKIQKNNINFEKKDIETKLI HCCCCCCCHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ERNIPKDFLSRIKDLSNNPTTYKNALYNLDKALDEHNESNLKYVLEHFLDQFSIYRYKVW HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MMMKRRDGVISDYEVIWKERFGEFVKKKVELNDYVKKVLSMEAREREQRSRERLERINGQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQAQVQTQTGELSNNQEQDSVNTPPERIYLGENRNNIYGRSNIVKDSLGFKTIKGITLES CHHEEEHHCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHHHCCCHHHCCCCHHH LGIDKKAI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA