Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496692
Identifier: 11496692
GI number: 11496692
Start: 12681
End: 13169
Strand: Direct
Name: 11496692
Synonym: BBG15
Alternate gene names: NA
Gene position: 12681-13169 (Clockwise)
Preceding gene: 11496670
Following gene: 11496672
Centisome position: 42.6
GC content: 33.33
Gene sequence:
>489_bases TTGTTTACAAGTAGCCAAGTAAGTTTTCAAATTCTTTTTCAGATTAATGACAAATTCTTCTATGTGCTTCATCTAAGTAA TTTTGCAGACTCCTTTACTAAATCGCTTGTCCAGTTTGTATATTGGTTTTTAGGTTTTCTCTTCTTCAAAGATAGCCAAA TGGGTACTGCTGAGGATTCTATACCCTTATATGCTGCCCAACTTTTGATTTTTGTTAGACTTGGAGCTGGCAAGTTGTTG TTATATGCCTGTCCTGAGTCTAGAAATTCAGAAAGAGGGGAGCCTACCTTTACTTTTAAATTAATTCCCAAAGAAGTTTC TTCTAAATCAATATTTGTTACATTCGACAATCGTCCGGGGATATGTGATTTTAAGGAGTCCGACTTTTGTCGGATTTTAA AACCAACGAAACTTTTTGCATTATCAAATATAGATTTTCTTATTTTTTCTCCAATTTCCATTTGTTATCCTTTTGGTCAA CCAATATAA
Upstream 100 bases:
>100_bases TCAGAATTTCTCCAGTACTTTTTACTGCAAAGACAATTGATGGCAAGTCTAAGTTTGAACATGCAAACATTTCAGACTTG TAATATACTTTTGTGGTTGT
Downstream 100 bases:
>100_bases AGAAAGGGACAAGAATCAATACGAGGGAATAGGAAATCAAGTTGAGAGAGCAAGTACTTAAATTTACACTCTTTTTGATC TCCTTTACACCTAATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MFTSSQVSFQILFQINDKFFYVLHLSNFADSFTKSLVQFVYWFLGFLFFKDSQMGTAEDSIPLYAAQLLIFVRLGAGKLL LYACPESRNSERGEPTFTFKLIPKEVSSKSIFVTFDNRPGICDFKESDFCRILKPTKLFALSNIDFLIFSPISICYPFGQ PI
Sequences:
>Translated_162_residues MFTSSQVSFQILFQINDKFFYVLHLSNFADSFTKSLVQFVYWFLGFLFFKDSQMGTAEDSIPLYAAQLLIFVRLGAGKLL LYACPESRNSERGEPTFTFKLIPKEVSSKSIFVTFDNRPGICDFKESDFCRILKPTKLFALSNIDFLIFSPISICYPFGQ PI >Mature_162_residues MFTSSQVSFQILFQINDKFFYVLHLSNFADSFTKSLVQFVYWFLGFLFFKDSQMGTAEDSIPLYAAQLLIFVRLGAGKLL LYACPESRNSERGEPTFTFKLIPKEVSSKSIFVTFDNRPGICDFKESDFCRILKPTKLFALSNIDFLIFSPISICYPFGQ PI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18604
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTSSQVSFQILFQINDKFFYVLHLSNFADSFTKSLVQFVYWFLGFLFFKDSQMGTAEDS CCCCCCEEEEEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IPLYAAQLLIFVRLGAGKLLLYACPESRNSERGEPTFTFKLIPKEVSSKSIFVTFDNRPG CHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCC ICDFKESDFCRILKPTKLFALSNIDFLIFSPISICYPFGQPI CCCCCCCCCEEEECCCEEEEECCCCEEEECHHHHCCCCCCCC >Mature Secondary Structure MFTSSQVSFQILFQINDKFFYVLHLSNFADSFTKSLVQFVYWFLGFLFFKDSQMGTAEDS CCCCCCEEEEEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IPLYAAQLLIFVRLGAGKLLLYACPESRNSERGEPTFTFKLIPKEVSSKSIFVTFDNRPG CHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCC ICDFKESDFCRILKPTKLFALSNIDFLIFSPISICYPFGQPI CCCCCCCCCEEEECCCEEEEECCCCEEEECHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA