Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496695
Identifier: 11496695
GI number: 11496695
Start: 25962
End: 26390
Strand: Direct
Name: 11496695
Synonym: BBG30
Alternate gene names: NA
Gene position: 25962-26390 (Clockwise)
Preceding gene: 11496672
Following gene: 11496673
Centisome position: 87.22
GC content: 37.3
Gene sequence:
>429_bases GTGGCTTTAGGAGGTAAAATGAGAATAAGAATGAAACATTTAGTAAGAAGGCTTTACTTAAGAAGGGACAAGATTTGGCA TGTTTACAGAAGTACGGAAATTCAAAACAAAGCTAAAGACAAAAGCATTACTAATTTTCCTAAATTAGAACCAGAAGATT TTGACTATGAGTATATTTACAAGTTCGTGGATGAGTGGATTCAGAAGAAATACAACGATAAATTAGGGTTTACCATCCAA AAGGTAGATGGTCTTGAATATATTTGTAAGGCAAAAAGGTATGCAAGTTTAAAGAAAATATTGGCTAGGATTGTCAAAGA CTATAAAGATATATTTCTTGGCAGGTTGCAAAAGAATGTTGCTGGTGCACAAGCGGGATCCGGGGGGAGTGGAGGTAAGG GGAGCAAGCCGGCGGGAACAGGAGGATAA
Upstream 100 bases:
>100_bases TGGAAGAAGTAACATCGTTAAGGATTCCTTGGGCTTTAAGACAATTAAAGGAATTACTCTTGAAAGCCTTGGAATTGATA AAAAAGCAATTTAAGCCTAG
Downstream 100 bases:
>100_bases TATTAGTTCACAAAAATAATAAGGAGGAAAATATTAGCTTTAGAATAGTAAAAAGACCAGTAAAACCCGCAAGTTCTGAA AAGGTTGTTGAAACTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MALGGKMRIRMKHLVRRLYLRRDKIWHVYRSTEIQNKAKDKSITNFPKLEPEDFDYEYIYKFVDEWIQKKYNDKLGFTIQ KVDGLEYICKAKRYASLKKILARIVKDYKDIFLGRLQKNVAGAQAGSGGSGGKGSKPAGTGG
Sequences:
>Translated_142_residues MALGGKMRIRMKHLVRRLYLRRDKIWHVYRSTEIQNKAKDKSITNFPKLEPEDFDYEYIYKFVDEWIQKKYNDKLGFTIQ KVDGLEYICKAKRYASLKKILARIVKDYKDIFLGRLQKNVAGAQAGSGGSGGKGSKPAGTGG >Mature_141_residues ALGGKMRIRMKHLVRRLYLRRDKIWHVYRSTEIQNKAKDKSITNFPKLEPEDFDYEYIYKFVDEWIQKKYNDKLGFTIQK VDGLEYICKAKRYASLKKILARIVKDYKDIFLGRLQKNVAGAQAGSGGSGGKGSKPAGTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16325; Mature: 16194
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGGKMRIRMKHLVRRLYLRRDKIWHVYRSTEIQNKAKDKSITNFPKLEPEDFDYEYIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH KFVDEWIQKKYNDKLGFTIQKVDGLEYICKAKRYASLKKILARIVKDYKDIFLGRLQKNV HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAQAGSGGSGGKGSKPAGTGG HCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALGGKMRIRMKHLVRRLYLRRDKIWHVYRSTEIQNKAKDKSITNFPKLEPEDFDYEYIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH KFVDEWIQKKYNDKLGFTIQKVDGLEYICKAKRYASLKKILARIVKDYKDIFLGRLQKNV HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAQAGSGGSGGKGSKPAGTGG HCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA