Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is 15595031
Identifier: 15595031
GI number: 15595031
Start: 727737
End: 728675
Strand: Direct
Name: 15595031
Synonym: BB0686
Alternate gene names: NA
Gene position: 727737-728675 (Clockwise)
Preceding gene: 15595030
Following gene: 15595032
Centisome position: 79.91
GC content: 29.5
Gene sequence:
>939_bases ATGAAAATAAAGTGTAAAGTTCATGCAAGCTTAGCTTTAATTAAATATTGGGGGAAAAAGGATGTTTTTTTAAACATTCC AGCTACTTCCAGTCTTGCTGTTAGTGTTGACAAGTTTTATTCAATAAGTGAGCTTGAACTTTCAAATCGAGATGAAATAA TTTTAAATTCAAAGCCAGTTATATTAAAAAATAGAGAAAAGGTGTTTTTTGATTATGCAAGAAAAATTCTTAATGAACCA AATGTTAGATTTAAAATTAAAAGTAAAAACAATTTCCCGACAGCAGCAGGCCTTGCAAGTTCAAGTTCAGGTTTTGCTTC TATTGCTGCTTGTATTTTGAAATATTTTAATAAATATTCTTGTAATAGCGCATCTAATCTTGCAAGAGTAGGATCGGCTT CTGCGGCAAGGGCTATTTACGGGGGGTTTACTATTTTAAAAGAGGGTTCAAAAGAATCTTTTCAATTAAGAGATCAATCT TATTTTAATGATTTGCGAATAATATTTGCCATAATTGATAGTAATGAAAAAGAATTGTCTTCAAGAGCCGCAATGAATAT TTGCAAACGGCATAAATTTTATTATGATGCTTGGATTGCCTCTAGTAAAAAGATTTTTAAAGACGCTTTATATTTTTTTT TAAAAAAAGATTTTATACATTTTGGAGCAACTATTGTAAAAAGTTATCAGAATATGTTTGCCTTAATGTTTGCATCTTCT ATTTTTTATTTTAAAAATAGTACAATAGATTTAATTAGGTATGCTGCTGATTTGAGAAATGAGGGGATTTTTGTATTTGA GACGATGGATGCAGGCCCCCAAGTAAAGTTTCTTTGTTTGGAGGAAAATTTAAATACTATTTTAAAAGGACTTAAGCAAA ATTTTACTGGCATTGATTTTATTGTTTCAAAGGTTGGGTGTGACTTAGAATGGATTTGA
Upstream 100 bases:
>100_bases TCTGATTTTGAAAAAGACAAATTATTATTGGAAATGGAAAGAATGAATATTTATTCTTTTGATTTTGCTTTTAAAATTTT GAAGAAAATAAGGTTAGAGA
Downstream 100 bases:
>100_bases TTAGTTTTTCTGTACCCGGAAATTTACTTTTAATGGGGGAGTATACTATTTTAGAGGAAAAGGGATTGGGGTTGGCAATT GCCATCAACAAGAGAGCATT
Product: mevalonate pyrophosphate decarboxylase
Products: ADP; phosphate; isopentenyl diphosphate; CO2
Alternate protein names: Mevalonate Diphosphate Decarboxylase; Mevalonate Pyrophosphate Decarboxylase; Phosphomevalonate Kinase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKIKCKVHASLALIKYWGKKDVFLNIPATSSLAVSVDKFYSISELELSNRDEIILNSKPVILKNREKVFFDYARKILNEP NVRFKIKSKNNFPTAAGLASSSSGFASIAACILKYFNKYSCNSASNLARVGSASAARAIYGGFTILKEGSKESFQLRDQS YFNDLRIIFAIIDSNEKELSSRAAMNICKRHKFYYDAWIASSKKIFKDALYFFLKKDFIHFGATIVKSYQNMFALMFASS IFYFKNSTIDLIRYAADLRNEGIFVFETMDAGPQVKFLCLEENLNTILKGLKQNFTGIDFIVSKVGCDLEWI
Sequences:
>Translated_312_residues MKIKCKVHASLALIKYWGKKDVFLNIPATSSLAVSVDKFYSISELELSNRDEIILNSKPVILKNREKVFFDYARKILNEP NVRFKIKSKNNFPTAAGLASSSSGFASIAACILKYFNKYSCNSASNLARVGSASAARAIYGGFTILKEGSKESFQLRDQS YFNDLRIIFAIIDSNEKELSSRAAMNICKRHKFYYDAWIASSKKIFKDALYFFLKKDFIHFGATIVKSYQNMFALMFASS IFYFKNSTIDLIRYAADLRNEGIFVFETMDAGPQVKFLCLEENLNTILKGLKQNFTGIDFIVSKVGCDLEWI >Mature_312_residues MKIKCKVHASLALIKYWGKKDVFLNIPATSSLAVSVDKFYSISELELSNRDEIILNSKPVILKNREKVFFDYARKILNEP NVRFKIKSKNNFPTAAGLASSSSGFASIAACILKYFNKYSCNSASNLARVGSASAARAIYGGFTILKEGSKESFQLRDQS YFNDLRIIFAIIDSNEKELSSRAAMNICKRHKFYYDAWIASSKKIFKDALYFFLKKDFIHFGATIVKSYQNMFALMFASS IFYFKNSTIDLIRYAADLRNEGIFVFETMDAGPQVKFLCLEENLNTILKGLKQNFTGIDFIVSKVGCDLEWI
Specific function: Unknown
COG id: COG3407
COG function: function code I; Mevalonate pyrophosphate decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505289, Length=327, Percent_Identity=26.2996941896024, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17537201, Length=325, Percent_Identity=26.4615384615385, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324371, Length=303, Percent_Identity=28.3828382838284, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI28571205, Length=327, Percent_Identity=24.1590214067278, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.33
Molecular weight: Translated: 35413; Mature: 35413
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKCKVHASLALIKYWGKKDVFLNIPATSSLAVSVDKFYSISELELSNRDEIILNSKPV CEEEEEEHHHEEEEEECCCCCEEEECCCCCCEEEEHHHHCCEEEEECCCCCEEEECCCCE ILKNREKVFFDYARKILNEPNVRFKIKSKNNFPTAAGLASSSSGFASIAACILKYFNKYS EEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC CNSASNLARVGSASAARAIYGGFTILKEGSKESFQLRDQSYFNDLRIIFAIIDSNEKELS CCCHHHHHHHCCCHHHHHHHCCEEEEECCCCCCEEECHHHHHCCEEEEEEEECCCHHHHH SRAAMNICKRHKFYYDAWIASSKKIFKDALYFFLKKDFIHFGATIVKSYQNMFALMFASS HHHHHHHHHHCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFYFKNSTIDLIRYAADLRNEGIFVFETMDAGPQVKFLCLEENLNTILKGLKQNFTGIDF HHEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCHHHH IVSKVGCDLEWI HHHHHCCCEECC >Mature Secondary Structure MKIKCKVHASLALIKYWGKKDVFLNIPATSSLAVSVDKFYSISELELSNRDEIILNSKPV CEEEEEEHHHEEEEEECCCCCEEEECCCCCCEEEEHHHHCCEEEEECCCCCEEEECCCCE ILKNREKVFFDYARKILNEPNVRFKIKSKNNFPTAAGLASSSSGFASIAACILKYFNKYS EEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC CNSASNLARVGSASAARAIYGGFTILKEGSKESFQLRDQSYFNDLRIIFAIIDSNEKELS CCCHHHHHHHCCCHHHHHHHCCEEEEECCCCCCEEECHHHHHCCEEEEEEEECCCHHHHH SRAAMNICKRHKFYYDAWIASSKKIFKDALYFFLKKDFIHFGATIVKSYQNMFALMFASS HHHHHHHHHHCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFYFKNSTIDLIRYAADLRNEGIFVFETMDAGPQVKFLCLEENLNTILKGLKQNFTGIDF HHEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCHHHH IVSKVGCDLEWI HHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; (R)-5-diphosphomevalonate
Specific reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA