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The map label for this gene is yvaM

Identifier: 16080417

GI number: 16080417

Start: 3455472

End: 3456242

Strand: Direct

Name: yvaM

Synonym: BSU33640

Alternate gene names: 16080417

Gene position: 3455472-3456242 (Clockwise)

Preceding gene: 16080406

Following gene: 16080419

Centisome position: 81.97

GC content: 47.21

Gene sequence:

>771_bases
ATGCCGCTTATCAGCATAGACAGCAGGAAACATCTTTTTTATGAAGAATATGGACAGGGAATCCCTATCATTTTTATCCA
CCCGCCGGGCATGGGACGAAAGGTTTTTTATTATCAGCGCCTTCTATCCAAGCATTTCAGGGTGATTTTTCCGGATTTAA
GTGGCCACGGTGATAGTGATCACATCGATCAGCCAGCGTCTATTTCCTATTACGCAAACGAGATCGCGCAATTCATGGAC
GCTTTGCACATTGATAAAGCTGTGTTATTCGGGTATTCTGCCGGAGGCTTAATCGCGCAGCATATCGGCTTCACCCGCCC
GGACAAAGTGTCACACCTTATTCTGTCCGGCGCCTACCCCGCTGTTCATAACGTAATCGGCCAGAAGCTGCACAAACTGG
GAATGTATCTGCTTGAAAAAAACCCCGGTTTGCTCATGAAAATCCTCGCTGGCAGCCACACAAAAGACAGACAGCTTCGC
AGCATATTAACAGACCATATGAAAAAAGCAGACCAGGCCCATTGGCATCAGTATTATCTGGATTCGCTTGGCTACAACTG
CATTGAACAGCTGCCCCGCCTAGAAATGCCAATGCTGTTTATGTATGGCGGCCTGCGGGACTGGACCTTTACAAACGCAG
GCTATTACCGAAGATCGTGCAGACATGCCGAATTTTTCAGATTGGAATATCAGGGACATCAATTGCCGACAAAACAATGG
AAAACGTGCAATGAGCTGGTGACAGGGTTTGTGCTGACACATCATTCATAG

Upstream 100 bases:

>100_bases
AAAGGGTTGGCATGTCACGCTGTATCAGACGCCAAAAGGCCGGATAAGACGTTTTATCTTGGTTACCCTATTCATATGAA
AAGGTCAAAGGAGAAAAGCG

Downstream 100 bases:

>100_bases
GAATAGAAAACGCTTGGCTTCCTTGCGTTTTTTGTTACTTTATTGACTTTTGTCAACGAAATCATAGTAAAAAAGATCCT
CAAATTTCAAATTAAAATAG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIFPDLSGHGDSDHIDQPASISYYANEIAQFMD
ALHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYPAVHNVIGQKLHKLGMYLLEKNPGLLMKILAGSHTKDRQLR
SILTDHMKKADQAHWHQYYLDSLGYNCIEQLPRLEMPMLFMYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQW
KTCNELVTGFVLTHHS

Sequences:

>Translated_256_residues
MPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIFPDLSGHGDSDHIDQPASISYYANEIAQFMD
ALHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYPAVHNVIGQKLHKLGMYLLEKNPGLLMKILAGSHTKDRQLR
SILTDHMKKADQAHWHQYYLDSLGYNCIEQLPRLEMPMLFMYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQW
KTCNELVTGFVLTHHS
>Mature_255_residues
PLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIFPDLSGHGDSDHIDQPASISYYANEIAQFMDA
LHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYPAVHNVIGQKLHKLGMYLLEKNPGLLMKILAGSHTKDRQLRS
ILTDHMKKADQAHWHQYYLDSLGYNCIEQLPRLEMPMLFMYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQWK
TCNELVTGFVLTHHS

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVAM_BACSU (O32234)

Other databases:

- EMBL:   AL009126
- PIR:   B70028
- RefSeq:   NP_391244.1
- ProteinModelPortal:   O32234
- SMR:   O32234
- EnsemblBacteria:   EBBACT00000002007
- GeneID:   938476
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33640
- NMPDR:   fig|224308.1.peg.3370
- GenoList:   BSU33640
- GeneTree:   EBGT00050000000443
- OMA:   TFYSHAN
- ProtClustDB:   CLSK2752513
- BioCyc:   BSUB:BSU33640-MONOMER
- InterPro:   IPR000073
- PRINTS:   PR00111

Pfam domain/function: PF00561 Abhydrolase_1

EC number: NA

Molecular weight: Translated: 29580; Mature: 29448

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIFPDLSGHGDSD
CCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCC
HIDQPASISYYANEIAQFMDALHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCCHHHHHHHCCCCH
AVHNVIGQKLHKLGMYLLEKNPGLLMKILAGSHTKDRQLRSILTDHMKKADQAHWHQYYL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLGYNCIEQLPRLEMPMLFMYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQW
HHHCHHHHHHCCCCCCCHHHHHCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCCCHHHH
KTCNELVTGFVLTHHS
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIFPDLSGHGDSD
CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCC
HIDQPASISYYANEIAQFMDALHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCCHHHHHHHCCCCH
AVHNVIGQKLHKLGMYLLEKNPGLLMKILAGSHTKDRQLRSILTDHMKKADQAHWHQYYL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLGYNCIEQLPRLEMPMLFMYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQW
HHHCHHHHHHCCCCCCCHHHHHCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCCCHHHH
KTCNELVTGFVLTHHS
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377