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The map label for this gene is gatC

Identifier: 15607091

GI number: 15607091

Start: 1515575

End: 1515859

Strand: Direct

Name: gatC

Synonym: aq_2147a

Alternate gene names: 15607091

Gene position: 1515575-1515859 (Clockwise)

Preceding gene: 15607089

Following gene: 15607092

Centisome position: 97.69

GC content: 43.86

Gene sequence:

>285_bases
ATGGTTGACAGGGAGTGGGTTTTAAAGATAGCTAAACTAGCAAGGCTGGAGCTAAAAGAAGAAGAAATAGAGGTATTCCA
GAAACAGCTCTCGGATATACTGGATTTCATTGATCAACTCAAGGAACTTGACACGGAAAATGTAGAACCCTATATTCAAG
AATTCGAAGAAACTCCCATGAGGGAAGATGAACCCCATCCTTCCCTCGACAGGGAAAAAGCTTTGATGAACGCCCCAGAG
AGGAAGGATGGGTTCTTCGTAGTTCCCAGAGTTGTGGAGGTTTAG

Upstream 100 bases:

>100_bases
TGCCATATCGGCGCTCTCCCAGCTGAGCTACCGCCCCTACTGACAGAATAGAAATTATAATCCTTTTAAATGAAGGTTTC
AAGTATCTATAATACATACT

Downstream 100 bases:

>100_bases
TATGGCAAGGATGTCCGAGAACTTATCTGAGAAGAAGAAGGCTTTAGAAGTTGCACTTTCAAACATCGAAAAACGTTTCG
GTAAAGGGGCAGTTATGCCC

Product: glutamyl-tRNA (Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEETPMREDEPHPSLDREKALMNAPE
RKDGFFVVPRVVEV

Sequences:

>Translated_94_residues
MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEETPMREDEPHPSLDREKALMNAPE
RKDGFFVVPRVVEV
>Mature_94_residues
MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEETPMREDEPHPSLDREKALMNAPE
RKDGFFVVPRVVEV

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_AQUAE (O67904)

Other databases:

- EMBL:   AE000657
- PIR:   D70484
- RefSeq:   NP_214473.1
- PDB:   3H0L
- PDB:   3H0M
- PDB:   3H0R
- PDBsum:   3H0L
- PDBsum:   3H0M
- PDBsum:   3H0R
- ProteinModelPortal:   O67904
- SMR:   O67904
- GeneID:   1193893
- GenomeReviews:   AE000657_GR
- NMPDR:   fig|224324.1.peg.1488
- HOGENOM:   HBG586403
- OMA:   PLFHPIS
- BioCyc:   AAEO224324:AQ_2148-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11215; Mature: 11215

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEETPM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
REDEPHPSLDREKALMNAPERKDGFFVVPRVVEV
CCCCCCCCCCHHHHHHCCCCCCCCEEECCHHHCC
>Mature Secondary Structure
MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEETPM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
REDEPHPSLDREKALMNAPERKDGFFVVPRVVEV
CCCCCCCCCCHHHHHHCCCCCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320