Definition | Aquifex aeolicus VF5, complete genome. |
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Accession | NC_000918 |
Length | 1,551,335 |
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The map label for this gene is yyaL [H]
Identifier: 15607089
GI number: 15607089
Start: 1512591
End: 1514669
Strand: Direct
Name: yyaL [H]
Synonym: aq_2146
Alternate gene names: 15607089
Gene position: 1512591-1514669 (Clockwise)
Preceding gene: 15607088
Following gene: 15607091
Centisome position: 97.5
GC content: 42.42
Gene sequence:
>2079_bases ATGGAAAAGAAACCCAACAGACTCATAAAGGAAAAGAGTCCATACCTCAGACAACACGCTTATAATCCCGTTGACTGGTA CCCCTGGGGTGAGGAAGCCTTTAAGAAGGCTAAAGAGGAAGACAAGCCCATATTCCTCTCAATAGGGTACTCCACGTGTC ACTGGTGTCACGTTATGGAAAAGGAGAGTTTTGAGGACCCAGAAATAGCCGAAATTCTTAACAATTACTTCGTTCCTATA AAGGTTGACCGTGAAGAAAGGCCCGACGTTGACGCTTTTTACATGAGCGTGTGTCAGGCTATGACGGGAACGGGCGGGTG GCCTCTTACGATAATAATGACACCCGATAAAGAACCTTTCTTTGCAGGAACCTACATACCTAAGGAAGGAATGTTCGGAA GACCAGGACTCAGGGACTTACTCTTAACGATAAGGGAACTCTGGGAAAAGGACAGGACGAAAATCCTGAATACCGCTAAA CACCTAGTGAAAGCCCTTCAAGAAGCGTCAAGGGAAACCCAAAAAGCCCAGATAGGTGAGGAAACTATACACAGGGCATT TTCGGAATTGTTTTCTTCATACGACGAGCATTTCGGAGGATTCGGCTCCGCTCCCAAATTCCCTACTCCCCACAACTTAA TGTTTTTAGGGAGGTACTACTACAGGTATAAAAGGGAACAGGCTCTGAAGATGATAGAAAAGACTCTCACAAATATGCGC ATGGGAGGGATATACGACCACGTAGGCTTTGGTTTCCATAGATATTCAACCGATAGAGAATGGATACTCCCTCACTTTGA GAAGATGCTCTACGACCAGGCAATGCTCCTTTTCGCTTACACAGAGGGATATCAGCTTTTAAAGAAAGATCTGTTTAAAC AAACAGTTTACGAGATCGTTGATTTCCTTAAAAGGGATATGCTCTCTCCGGAAGGTGCCTTTTACTCGGCGTGGGATGCG GACAGCGAAGGTGAGGAAGGTAAGTTCTACACGTGGAGTTTTGAAGAATTAAAAGAAGTACTTGATCCCGAAGAACTGGA ACTTGCAGTGAAAGTGTTCAACCTCTCTCAGGAGGGAAATTACCTTGAGGAGGCCACAAAGGTCAAAACGGGAAGAAACG TCCTTTACATAGGAAAATCCTACGAAGAACTGGCAAAAGAACTCGGAATTTCTGAGAAAGAGTTAAAGGAAAAGCTTGAA AGGATTAGGAAAAAACTTTTCGAAGCGAGAGAAAAGAGGGTAAAACCCTTAAGAGATGAGAAGATACTCACCGACTGGAA CGGCTTGACGATAGCAGCACTTTCATACGCGGGTAAAGTGTTCGGAGAAAAGGAATGGATAGATTTAGCAAAAGGTGCGG CGGACTTCGTCCTGAAAAATATGAGAACGGAAAATGGTTTACTCCTTCACAGGTACATGGAAGGAGAAGCCAAGTACTGG GGTTTTCTGGAAGATTACGCTTACTTTATATGGGGACTGATGGAACTCTACGAGGCTACACTAGACTCAAAATACTTAGA AGAAGTTATTAAACTTCAGGAAATTCAGATAAAGCATTTCTGGGATAAGGAGAACGGAGGATTTTTCCAAACTCCCGACT TTTTCACTGAAATACCTGTAAGGAAAAAAGAAGTTTACGACGGAGCAATTCCTTCTGGAAATTCAGTCTCGGCTTATAAT CTCATAAGGCTTGGAAGGTTAATTTCACGAAGCGAATACGAGAAATACGGGACAAAAACCCTTGAAGCCTTTTCATGGGA AATAGCTAACTTCCCTTCAGCTCACACATTTTCAATAATAGCTTTAGACCTTATCGTAAACGGAACTAAGGAGTTGGTAA TAGTCCCTACAGATGACTCATGGAGGAATTTAAAGGCTCAACTGGATAAGGAGTATTTACCAGACCTGCTGATACTGAAA AAAGACAAGGTTATAGAAAAACTTTCAGAAAACTTGGAACAAATGAAACCTGTAGAAGGAAAAACTACTTATTACCTGTG CAGAAATTACACCTGTGAAAGCCCACAGATACAATCAGATAAAGTATTAGAAAGGATAAAAGGGAAAGGAAAGGGTTAG
Upstream 100 bases:
>100_bases AACTTGCCCTACAGAAGGGTTTGCATAGAACCCGATTACGAAAGGCTCTTAGCTGAGAAAGGGCATAGAAAGGAAGAGTA AAAGTTATTACCCTTTCCTT
Downstream 100 bases:
>100_bases TAGAGAACGATTACGTCCACCGCCCTTTGTTCGGGGTGCCTTTCCCCTATTAAATTTGCAAGCTCTTCACCGTAGGAAGC TATCCTTACTTTTTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MEKKPNRLIKEKSPYLRQHAYNPVDWYPWGEEAFKKAKEEDKPIFLSIGYSTCHWCHVMEKESFEDPEIAEILNNYFVPI KVDREERPDVDAFYMSVCQAMTGTGGWPLTIIMTPDKEPFFAGTYIPKEGMFGRPGLRDLLLTIRELWEKDRTKILNTAK HLVKALQEASRETQKAQIGEETIHRAFSELFSSYDEHFGGFGSAPKFPTPHNLMFLGRYYYRYKREQALKMIEKTLTNMR MGGIYDHVGFGFHRYSTDREWILPHFEKMLYDQAMLLFAYTEGYQLLKKDLFKQTVYEIVDFLKRDMLSPEGAFYSAWDA DSEGEEGKFYTWSFEELKEVLDPEELELAVKVFNLSQEGNYLEEATKVKTGRNVLYIGKSYEELAKELGISEKELKEKLE RIRKKLFEAREKRVKPLRDEKILTDWNGLTIAALSYAGKVFGEKEWIDLAKGAADFVLKNMRTENGLLLHRYMEGEAKYW GFLEDYAYFIWGLMELYEATLDSKYLEEVIKLQEIQIKHFWDKENGGFFQTPDFFTEIPVRKKEVYDGAIPSGNSVSAYN LIRLGRLISRSEYEKYGTKTLEAFSWEIANFPSAHTFSIIALDLIVNGTKELVIVPTDDSWRNLKAQLDKEYLPDLLILK KDKVIEKLSENLEQMKPVEGKTTYYLCRNYTCESPQIQSDKVLERIKGKGKG
Sequences:
>Translated_692_residues MEKKPNRLIKEKSPYLRQHAYNPVDWYPWGEEAFKKAKEEDKPIFLSIGYSTCHWCHVMEKESFEDPEIAEILNNYFVPI KVDREERPDVDAFYMSVCQAMTGTGGWPLTIIMTPDKEPFFAGTYIPKEGMFGRPGLRDLLLTIRELWEKDRTKILNTAK HLVKALQEASRETQKAQIGEETIHRAFSELFSSYDEHFGGFGSAPKFPTPHNLMFLGRYYYRYKREQALKMIEKTLTNMR MGGIYDHVGFGFHRYSTDREWILPHFEKMLYDQAMLLFAYTEGYQLLKKDLFKQTVYEIVDFLKRDMLSPEGAFYSAWDA DSEGEEGKFYTWSFEELKEVLDPEELELAVKVFNLSQEGNYLEEATKVKTGRNVLYIGKSYEELAKELGISEKELKEKLE RIRKKLFEAREKRVKPLRDEKILTDWNGLTIAALSYAGKVFGEKEWIDLAKGAADFVLKNMRTENGLLLHRYMEGEAKYW GFLEDYAYFIWGLMELYEATLDSKYLEEVIKLQEIQIKHFWDKENGGFFQTPDFFTEIPVRKKEVYDGAIPSGNSVSAYN LIRLGRLISRSEYEKYGTKTLEAFSWEIANFPSAHTFSIIALDLIVNGTKELVIVPTDDSWRNLKAQLDKEYLPDLLILK KDKVIEKLSENLEQMKPVEGKTTYYLCRNYTCESPQIQSDKVLERIKGKGKG >Mature_692_residues MEKKPNRLIKEKSPYLRQHAYNPVDWYPWGEEAFKKAKEEDKPIFLSIGYSTCHWCHVMEKESFEDPEIAEILNNYFVPI KVDREERPDVDAFYMSVCQAMTGTGGWPLTIIMTPDKEPFFAGTYIPKEGMFGRPGLRDLLLTIRELWEKDRTKILNTAK HLVKALQEASRETQKAQIGEETIHRAFSELFSSYDEHFGGFGSAPKFPTPHNLMFLGRYYYRYKREQALKMIEKTLTNMR MGGIYDHVGFGFHRYSTDREWILPHFEKMLYDQAMLLFAYTEGYQLLKKDLFKQTVYEIVDFLKRDMLSPEGAFYSAWDA DSEGEEGKFYTWSFEELKEVLDPEELELAVKVFNLSQEGNYLEEATKVKTGRNVLYIGKSYEELAKELGISEKELKEKLE RIRKKLFEAREKRVKPLRDEKILTDWNGLTIAALSYAGKVFGEKEWIDLAKGAADFVLKNMRTENGLLLHRYMEGEAKYW GFLEDYAYFIWGLMELYEATLDSKYLEEVIKLQEIQIKHFWDKENGGFFQTPDFFTEIPVRKKEVYDGAIPSGNSVSAYN LIRLGRLISRSEYEKYGTKTLEAFSWEIANFPSAHTFSIIALDLIVNGTKELVIVPTDDSWRNLKAQLDKEYLPDLLILK KDKVIEKLSENLEQMKPVEGKTTYYLCRNYTCESPQIQSDKVLERIKGKGKG
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=717, Percent_Identity=40.4463040446304, Blast_Score=520, Evalue=1e-147, Organism=Caenorhabditis elegans, GI25147430, Length=703, Percent_Identity=35.9886201991465, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI20129985, Length=717, Percent_Identity=37.7963737796374, Blast_Score=457, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 80865; Mature: 80865
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKPNRLIKEKSPYLRQHAYNPVDWYPWGEEAFKKAKEEDKPIFLSIGYSTCHWCHVME CCCCCCHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHH KESFEDPEIAEILNNYFVPIKVDREERPDVDAFYMSVCQAMTGTGGWPLTIIMTPDKEPF HCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC FAGTYIPKEGMFGRPGLRDLLLTIRELWEKDRTKILNTAKHLVKALQEASRETQKAQIGE EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIHRAFSELFSSYDEHFGGFGSAPKFPTPHNLMFLGRYYYRYKREQALKMIEKTLTNMR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGGIYDHVGFGFHRYSTDREWILPHFEKMLYDQAMLLFAYTEGYQLLKKDLFKQTVYEIV CCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLKRDMLSPEGAFYSAWDADSEGEEGKFYTWSFEELKEVLDPEELELAVKVFNLSQEGN HHHHHHCCCCCCCEEECCCCCCCCCCCCEEEECHHHHHHHCCCHHHHHHHHHEECCCCCC YLEEATKVKTGRNVLYIGKSYEELAKELGISEKELKEKLERIRKKLFEAREKRVKPLRDE HHHHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KILTDWNGLTIAALSYAGKVFGEKEWIDLAKGAADFVLKNMRTENGLLLHRYMEGEAKYW CCEECCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHH GFLEDYAYFIWGLMELYEATLDSKYLEEVIKLQEIQIKHFWDKENGGFFQTPDFFTEIPV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCC RKKEVYDGAIPSGNSVSAYNLIRLGRLISRSEYEKYGTKTLEAFSWEIANFPSAHTFSII HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHE ALDLIVNGTKELVIVPTDDSWRNLKAQLDKEYLPDLLILKKDKVIEKLSENLEQMKPVEG EEEHHCCCCCCEEEEECCCCHHHHHHHHCHHHCCHHEEECHHHHHHHHHHHHHHCCCCCC KTTYYLCRNYTCESPQIQSDKVLERIKGKGKG CEEEEEEECCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MEKKPNRLIKEKSPYLRQHAYNPVDWYPWGEEAFKKAKEEDKPIFLSIGYSTCHWCHVME CCCCCCHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHH KESFEDPEIAEILNNYFVPIKVDREERPDVDAFYMSVCQAMTGTGGWPLTIIMTPDKEPF HCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC FAGTYIPKEGMFGRPGLRDLLLTIRELWEKDRTKILNTAKHLVKALQEASRETQKAQIGE EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIHRAFSELFSSYDEHFGGFGSAPKFPTPHNLMFLGRYYYRYKREQALKMIEKTLTNMR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGGIYDHVGFGFHRYSTDREWILPHFEKMLYDQAMLLFAYTEGYQLLKKDLFKQTVYEIV CCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLKRDMLSPEGAFYSAWDADSEGEEGKFYTWSFEELKEVLDPEELELAVKVFNLSQEGN HHHHHHCCCCCCCEEECCCCCCCCCCCCEEEECHHHHHHHCCCHHHHHHHHHEECCCCCC YLEEATKVKTGRNVLYIGKSYEELAKELGISEKELKEKLERIRKKLFEAREKRVKPLRDE HHHHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KILTDWNGLTIAALSYAGKVFGEKEWIDLAKGAADFVLKNMRTENGLLLHRYMEGEAKYW CCEECCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHH GFLEDYAYFIWGLMELYEATLDSKYLEEVIKLQEIQIKHFWDKENGGFFQTPDFFTEIPV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCC RKKEVYDGAIPSGNSVSAYNLIRLGRLISRSEYEKYGTKTLEAFSWEIANFPSAHTFSII HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHE ALDLIVNGTKELVIVPTDDSWRNLKAQLDKEYLPDLLILKKDKVIEKLSENLEQMKPVEG EEEHHCCCCCCEEEEECCCCHHHHHHHHCHHHCCHHEEECHHHHHHHHHHHHHHCCCCCC KTTYYLCRNYTCESPQIQSDKVLERIKGKGKG CEEEEEEECCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]