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The map label for this gene is recA

Identifier: 15607092

GI number: 15607092

Start: 1515870

End: 1516907

Strand: Direct

Name: recA

Synonym: aq_2150

Alternate gene names: 15607092

Gene position: 1515870-1516907 (Clockwise)

Preceding gene: 15607091

Following gene: 15607093

Centisome position: 97.71

GC content: 44.03

Gene sequence:

>1038_bases
ATGTCCGAGAACTTATCTGAGAAGAAGAAGGCTTTAGAAGTTGCACTTTCAAACATCGAAAAACGTTTCGGTAAAGGGGC
AGTTATGCCCCTCAAATCCGTTGAAAAGGTTCAGGTAGAAACAATACCCACCGGATCACTGGCTCTCGACATAGCAACGG
GAGTGGGAGGAATCCCGAAGGGAAGAATTACGGAAATCTTCGGCGTTGAGAGTTCAGGAAAGACTACACTAGCCCTCCAT
GTCATAGCGGAAGCCCAAAAGAGGGGAGGAGTTGCGGTATTCATAGACGCGGAACACGCCCTTGATCCGAAGTACGCCAA
AAAACTTGGAGTTGACGTTGAAAACTTGTACATCTCACAACCAGACTATGGTGAACAGGCTCTGGAAATAGCAGAAAGCT
TAATAAACAGTGGTGCGGTGGACGTAATAGTTGTAGACTCGGTTGCAGCTCTTGTTCCGAAAGACGAACTCGAAGGAGAA
ATGGGTGAAGCACAGGTCGGAAAACAGGCAAGGCTTATGTCTCAGGCTCTCAGAAAGCTAAAAGGAGCTGTTCACAAAAG
CAATACTGCATTAATATTTATCAACCAAATAAGAGAAAAAATAGGTGTAATGTTTGGAAACCCTGAGACAACACCCGGAG
GAAGGGCACTAAAGTTCTTCTCAGATATGAGACTTGAAGTAAGGAGACTGGGAGACGTAAAAGAAGGCGGAGAAAAAAAG
GGCTACAGGGTAAAAGTGAGAGTAGTTAAAAACAAACTTGCACCGCCTTTCCAGGAAGCGGAGTTTGACATAATCTACGG
TGAAGGTATATGTAAACTATGTGATCTGATAGAAGTTGCAACTAATTTGGGAATTTTTACAAAGAGCGGTTCCTGGTACA
GTTACGGTGATAAGAGACTTGGTCAAGGCAAGGAGCAAGTGAAAAAGTACCTTCAAGAACACCCCGAATTAATTGATGAA
ATAGATCAAAAAGTAAGGGAGGCTGCAGGACTTGCTGGATCAAATATTGAGGAAAGCACTGGAGAAGAAGGCAAGTGA

Upstream 100 bases:

>100_bases
CATCCTTCCCTCGACAGGGAAAAAGCTTTGATGAACGCCCCAGAGAGGAAGGATGGGTTCTTCGTAGTTCCCAGAGTTGT
GGAGGTTTAGTATGGCAAGG

Downstream 100 bases:

>100_bases
TATACATCTAAAAGTTGGATCTAAACCTGTAATCAGAACACCTGATGGGCTAGACACTCTTGAAGAGTTCCCCCCTATTG
ACATTGATCTTTTTGAGGTA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSENLSEKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPKGRITEIFGVESSGKTTLALH
VIAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQPDYGEQALEIAESLINSGAVDVIVVDSVAALVPKDELEGE
MGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVKEGGEKK
GYRVKVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRLGQGKEQVKKYLQEHPELIDE
IDQKVREAAGLAGSNIEESTGEEGK

Sequences:

>Translated_345_residues
MSENLSEKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPKGRITEIFGVESSGKTTLALH
VIAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQPDYGEQALEIAESLINSGAVDVIVVDSVAALVPKDELEGE
MGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVKEGGEKK
GYRVKVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRLGQGKEQVKKYLQEHPELIDE
IDQKVREAAGLAGSNIEESTGEEGK
>Mature_344_residues
SENLSEKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPKGRITEIFGVESSGKTTLALHV
IAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQPDYGEQALEIAESLINSGAVDVIVVDSVAALVPKDELEGEM
GEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVKEGGEKKG
YRVKVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRLGQGKEQVKKYLQEHPELIDEI
DQKVREAAGLAGSNIEESTGEEGK

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=320, Percent_Identity=60.3125, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_AQUAE (O67905)

Other databases:

- EMBL:   AE000657
- PIR:   E70484
- RefSeq:   NP_214474.1
- ProteinModelPortal:   O67905
- SMR:   O67905
- GeneID:   1193894
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_2150
- NMPDR:   fig|224324.1.peg.1489
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   O67905
- ProtClustDB:   PRK09354
- BioCyc:   AAEO224324:AQ_2150-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37442; Mature: 37311

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENLSEKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
GRITEIFGVESSGKTTLALHVIAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQ
CCEEEEEECCCCCCEEEEEHEEHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHEEECC
PDYGEQALEIAESLINSGAVDVIVVDSVAALVPKDELEGEMGEAQVGKQARLMSQALRKL
CCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
KGAVHKSNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVKEGGEKK
HHHHCCCCCEEEEHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GYRVKVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRL
CCEEEEEEEHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHH
GQGKEQVKKYLQEHPELIDEIDQKVREAAGLAGSNIEESTGEEGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SENLSEKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
GRITEIFGVESSGKTTLALHVIAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQ
CCEEEEEECCCCCCEEEEEHEEHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHEEECC
PDYGEQALEIAESLINSGAVDVIVVDSVAALVPKDELEGEMGEAQVGKQARLMSQALRKL
CCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
KGAVHKSNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVKEGGEKK
HHHHCCCCCEEEEHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GYRVKVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRL
CCEEEEEEEHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHH
GQGKEQVKKYLQEHPELIDEIDQKVREAAGLAGSNIEESTGEEGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320