BacMap

Definition	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession	NC_000914
Length	536,165

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The map label for this gene is gabD

Identifier: 16519942

GI number: 16519942

Start: 198420

End: 199895

Strand: Direct

Name: gabD

Synonym: NGR_a01630

Alternate gene names: 16519942

Gene position: 198420-199895 (Clockwise)

Preceding gene: 16519943

Following gene: 16519938

Centisome position: 37.01

GC content: 59.96

Gene sequence:

>1476_bases
ATGACACTGACATCGGCATTGACGCGGCACCTGAAATGTCCCGAGCTTTTTCGCAACCTTGCCAATGAACCGCACCCTTC
GGTCGCTGGCCAGCGGCAACGGTTCTCCGTGTTTAACCCATCCACCGGCGAATTGCTGGCCGAAGTGCCGGATATGGGTG
CTGCCGATGCCCACGCGGCCATCGAAAGGGCTGATGCCGCACAGGAACCGTGGTCGGGACTGACCGCGCGGGCGCGATCG
GATATCCTCTGGAAATGGCACCGGTTCATTCTTGAACACAGCGATGACCTCGCAGCCATCCTGACCGCCGAAATGGGCAA
GCCGCTTGGCGAGGCGAAATCCGAAGTGCAGCATGCGGCAGCCTATCTTCAATGGTATGCGGAAGAGGCGAACCGCATCT
ATGGCGAAACCATCTCGGCGCCATCGACCGACCGGCGCATGCTGGTGATCAAACAGCCGATCGGCGTCGTCGGCGCCATC
ACACCCTGGAACTTTCCCGCCTCGATGGTGGCGCGCAAGATTTCGCCGGCGCTTGCGGCAGGCTGTACCGTCGTGCTCAA
GCCCGCCGAGCAGACGCCTCTGGTCGCAGGCGCGATGTTTGCATTGGCAAAACTGGCCGGTTTTCCGGACGGCGTCCTGA
ACCTGGTCTATGCGTCGGAGGGGGACGCGATCGGCCGCGAACTCTGCACCAATCCGAAGGTCCGGAAGATCAGCTTCACA
GGCTCGACCGAGGTCGGCCGGTTGCTGATGCGTCAGTGCTCCGACCAGATCAAGAGGATCAGCTTCGAACTCGGTGGCAA
CGCCCCCTTTATCGTCTTCGACGATGCCGACATCGACGCCGCGGTCGACGGAGCGATTCAGGCAAAATTCCGCAATGCGG
GACAGACCTGCGTGTCTGCCAACCGGATTTATGTTCAATCCGGCGTCTATGCCGAGTTCGCCGAAAAGTTCACCGAGCGG
GTGCGCACTCTGAAGGTCGGTGACGGCTTTGATCCGAATGTGGCGATCGGTCCATTGATCAATCAAGAGGCTCTCAAAAA
GATTGAACTCCACATCAGCGATGCCGTCCAGAAGGGCGCAAGGGTTCGCAGTGGCGGCCGTCGAACTGGATCATCCGGCA
CGTTCTTCGAACCGACGGTCGTCACGGATGTTTCTAAAACGATGCGTCTGGCTGAGGAAGAGACCTTCGGACCGCTTGCA
CCTCTGTTACGGTTCGATGATGCAGATCACGTTGTGCGCGAGGCGAATGACACGATCTATGGTCTGGCAGCTTACTTCTA
CGCCTCCAACCTGAAGCGGGTTTGGCGGGTGGCAGAAGCGCTGGAATATGGCATGGTCGGGATCAACACCGGCCGGATGT
CATCCGAGGCCGCGCCCTTCGGGGGCGTCAAGCAATCGGGTATTGGCCGGGAGGGGTCCAGGCATGGGCTGGAAGACTAC
CTCGACATGAAGTATCTCTGTGTGGGCGGGCTTTGA

Upstream 100 bases:

>100_bases
TCCAAGGGACGAGCCGGCGCAATGGCGATCATTGCTCCGGCTTTGCCTTTCGCGACAGGCGGGAAGAGGCGCAATCGAAC
GCGCGTGGGAGGAACGAAGA

Downstream 100 bases:

>100_bases
GGCTGTCGGGTGGAAGAACCCCCTCCCAGTTCGAATTGTTGAATTAGTTCCAACAGATGCTGCGCCTCGGCGTTCAAGGA
TCGACAAGCGGCGTCCGATT

Product: succinate-semialdehyde dehydrogenase GabD

Products: NA

Alternate protein names: SSDH

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTLTSALTRHLKCPELFRNLANEPHPSVAGQRQRFSVFNPSTGELLAEVPDMGAADAHAAIERADAAQEPWSGLTARARS
DILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAAAYLQWYAEEANRIYGETISAPSTDRRMLVIKQPIGVVGAI
TPWNFPASMVARKISPALAAGCTVVLKPAEQTPLVAGAMFALAKLAGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFT
GSTEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSANRIYVQSGVYAEFAEKFTER
VRTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGARVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLA
PLLRFDDADHVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDY
LDMKYLCVGGL

Sequences:

>Translated_491_residues
MTLTSALTRHLKCPELFRNLANEPHPSVAGQRQRFSVFNPSTGELLAEVPDMGAADAHAAIERADAAQEPWSGLTARARS
DILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAAAYLQWYAEEANRIYGETISAPSTDRRMLVIKQPIGVVGAI
TPWNFPASMVARKISPALAAGCTVVLKPAEQTPLVAGAMFALAKLAGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFT
GSTEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSANRIYVQSGVYAEFAEKFTER
VRTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGARVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLA
PLLRFDDADHVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDY
LDMKYLCVGGL
>Mature_490_residues
TLTSALTRHLKCPELFRNLANEPHPSVAGQRQRFSVFNPSTGELLAEVPDMGAADAHAAIERADAAQEPWSGLTARARSD
ILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAAAYLQWYAEEANRIYGETISAPSTDRRMLVIKQPIGVVGAIT
PWNFPASMVARKISPALAAGCTVVLKPAEQTPLVAGAMFALAKLAGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFTG
STEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSANRIYVQSGVYAEFAEKFTERV
RTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGARVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLAP
LLRFDDADHVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDYL
DMKYLCVGGL

Specific function: Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family

Homologues:

Organism=Homo sapiens, GI4507229, Length=460, Percent_Identity=50.4347826086956, Blast_Score=474, Evalue=1e-134,
Organism=Homo sapiens, GI25777721, Length=473, Percent_Identity=48.8372093023256, Blast_Score=463, Evalue=1e-130,
Organism=Homo sapiens, GI153266822, Length=485, Percent_Identity=40.2061855670103, Blast_Score=336, Evalue=3e-92,
Organism=Homo sapiens, GI25777724, Length=484, Percent_Identity=39.0495867768595, Blast_Score=318, Evalue=6e-87,
Organism=Homo sapiens, GI21361176, Length=474, Percent_Identity=37.5527426160338, Blast_Score=308, Evalue=1e-83,
Organism=Homo sapiens, GI25777732, Length=493, Percent_Identity=37.7281947261663, Blast_Score=305, Evalue=6e-83,
Organism=Homo sapiens, GI25777730, Length=480, Percent_Identity=36.6666666666667, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI25777728, Length=417, Percent_Identity=40.0479616306954, Blast_Score=296, Evalue=2e-80,
Organism=Homo sapiens, GI238814322, Length=425, Percent_Identity=37.1764705882353, Blast_Score=291, Evalue=7e-79,
Organism=Homo sapiens, GI21614513, Length=421, Percent_Identity=37.5296912114014, Blast_Score=288, Evalue=8e-78,
Organism=Homo sapiens, GI12007648, Length=459, Percent_Identity=33.7690631808279, Blast_Score=288, Evalue=8e-78,
Organism=Homo sapiens, GI115387104, Length=457, Percent_Identity=34.5733041575492, Blast_Score=281, Evalue=1e-75,
Organism=Homo sapiens, GI25777726, Length=484, Percent_Identity=35.7438016528926, Blast_Score=275, Evalue=8e-74,
Organism=Homo sapiens, GI25952152, Length=452, Percent_Identity=30.5309734513274, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI301500698, Length=282, Percent_Identity=36.1702127659575, Blast_Score=198, Evalue=7e-51,
Organism=Homo sapiens, GI310128103, Length=464, Percent_Identity=28.8793103448276, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI188035924, Length=464, Percent_Identity=28.8793103448276, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI11095441, Length=422, Percent_Identity=27.7251184834123, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI310128093, Length=463, Percent_Identity=28.7257019438445, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI310128091, Length=463, Percent_Identity=28.0777537796976, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI223972651, Length=458, Percent_Identity=29.6943231441048, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI310128089, Length=324, Percent_Identity=27.4691358024691, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=30.078125, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI73466520, Length=331, Percent_Identity=28.0966767371601, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557303, Length=331, Percent_Identity=28.0966767371601, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI206597441, Length=434, Percent_Identity=27.1889400921659, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597439, Length=434, Percent_Identity=27.1889400921659, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI22907049, Length=434, Percent_Identity=27.1889400921659, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI73695881, Length=340, Percent_Identity=29.7058823529412, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI73695879, Length=340, Percent_Identity=29.7058823529412, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4502043, Length=335, Percent_Identity=28.0597014925373, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI238814371, Length=335, Percent_Identity=28.0597014925373, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI71773324, Length=369, Percent_Identity=26.2872628726287, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI310128095, Length=310, Percent_Identity=27.4193548387097, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI310128087, Length=316, Percent_Identity=29.746835443038, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI238859541, Length=443, Percent_Identity=26.1851015801354, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI25777736, Length=436, Percent_Identity=26.605504587156, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI25777734, Length=436, Percent_Identity=26.605504587156, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI223972653, Length=458, Percent_Identity=27.0742358078603, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI310128099, Length=227, Percent_Identity=29.0748898678414, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI310128101, Length=241, Percent_Identity=28.6307053941909, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1789015, Length=461, Percent_Identity=58.7852494577007, Blast_Score=576, Evalue=1e-165,
Organism=Escherichia coli, GI1787684, Length=453, Percent_Identity=37.5275938189845, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI87081896, Length=471, Percent_Identity=35.244161358811, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1787715, Length=463, Percent_Identity=36.9330453563715, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1786504, Length=460, Percent_Identity=37.1739130434783, Blast_Score=271, Evalue=7e-74,
Organism=Escherichia coli, GI1787558, Length=472, Percent_Identity=32.4152542372881, Blast_Score=259, Evalue=4e-70,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=32.2222222222222, Blast_Score=245, Evalue=5e-66,
Organism=Escherichia coli, GI87082295, Length=470, Percent_Identity=33.8297872340426, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1788042, Length=438, Percent_Identity=32.1917808219178, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI1787250, Length=484, Percent_Identity=28.5123966942149, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787653, Length=400, Percent_Identity=23.75, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=452, Percent_Identity=44.4690265486726, Blast_Score=392, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI133930964, Length=463, Percent_Identity=38.6609071274298, Blast_Score=317, Evalue=7e-87,
Organism=Caenorhabditis elegans, GI25144435, Length=474, Percent_Identity=36.4978902953587, Blast_Score=303, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI17562198, Length=483, Percent_Identity=36.6459627329193, Blast_Score=303, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI32564736, Length=394, Percent_Identity=39.0862944162437, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=463, Percent_Identity=34.7732181425486, Blast_Score=280, Evalue=8e-76,
Organism=Caenorhabditis elegans, GI25143876, Length=462, Percent_Identity=34.8484848484849, Blast_Score=280, Evalue=9e-76,
Organism=Caenorhabditis elegans, GI71995606, Length=465, Percent_Identity=35.0537634408602, Blast_Score=263, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17551164, Length=460, Percent_Identity=34.5652173913044, Blast_Score=260, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI71995613, Length=405, Percent_Identity=34.0740740740741, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI115534176, Length=479, Percent_Identity=29.0187891440501, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI71986308, Length=415, Percent_Identity=28.433734939759, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI32566756, Length=414, Percent_Identity=28.0193236714976, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=414, Percent_Identity=28.0193236714976, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25146391, Length=414, Percent_Identity=28.0193236714976, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=417, Percent_Identity=27.0983213429257, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI115532534, Length=341, Percent_Identity=28.1524926686217, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17534447, Length=341, Percent_Identity=28.1524926686217, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32564151, Length=295, Percent_Identity=28.135593220339, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=180, Percent_Identity=27.2222222222222, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=493, Percent_Identity=47.2616632860041, Blast_Score=470, Evalue=1e-133,
Organism=Saccharomyces cerevisiae, GI6320917, Length=455, Percent_Identity=40.2197802197802, Blast_Score=322, Evalue=7e-89,
Organism=Saccharomyces cerevisiae, GI6324950, Length=456, Percent_Identity=38.1578947368421, Blast_Score=312, Evalue=6e-86,
Organism=Saccharomyces cerevisiae, GI6325196, Length=457, Percent_Identity=37.417943107221, Blast_Score=279, Evalue=7e-76,
Organism=Saccharomyces cerevisiae, GI6323821, Length=496, Percent_Identity=36.6935483870968, Blast_Score=277, Evalue=3e-75,
Organism=Saccharomyces cerevisiae, GI6323822, Length=494, Percent_Identity=35.6275303643725, Blast_Score=272, Evalue=7e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=479, Percent_Identity=28.1837160751566, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6323757, Length=339, Percent_Identity=28.3185840707965, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6321826, Length=472, Percent_Identity=25.635593220339, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281362580, Length=460, Percent_Identity=53.695652173913, Blast_Score=513, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472918, Length=460, Percent_Identity=53.695652173913, Blast_Score=513, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472926, Length=460, Percent_Identity=53.695652173913, Blast_Score=513, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472936, Length=460, Percent_Identity=53.695652173913, Blast_Score=513, Evalue=1e-145,
Organism=Drosophila melanogaster, GI21356737, Length=460, Percent_Identity=53.695652173913, Blast_Score=513, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24650465, Length=481, Percent_Identity=39.5010395010395, Blast_Score=345, Evalue=5e-95,
Organism=Drosophila melanogaster, GI20129399, Length=495, Percent_Identity=36.7676767676768, Blast_Score=303, Evalue=2e-82,
Organism=Drosophila melanogaster, GI24585660, Length=471, Percent_Identity=34.3949044585987, Blast_Score=278, Evalue=8e-75,
Organism=Drosophila melanogaster, GI24666674, Length=458, Percent_Identity=27.0742358078603, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24638878, Length=420, Percent_Identity=27.3809523809524, Blast_Score=178, Evalue=8e-45,
Organism=Drosophila melanogaster, GI24638876, Length=420, Percent_Identity=27.3809523809524, Blast_Score=178, Evalue=8e-45,
Organism=Drosophila melanogaster, GI45552499, Length=455, Percent_Identity=26.5934065934066, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360303, Length=454, Percent_Identity=26.2114537444934, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI281360299, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360297, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360295, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24586250, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360301, Length=455, Percent_Identity=26.1538461538462, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24668425, Length=262, Percent_Identity=29.3893129770992, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24668417, Length=262, Percent_Identity=29.3893129770992, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24668413, Length=262, Percent_Identity=29.3893129770992, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28574525, Length=459, Percent_Identity=25.2723311546841, Blast_Score=102, Evalue=9e-22,
Organism=Drosophila melanogaster, GI28571798, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28571796, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28571794, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28571802, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI28571800, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI28571806, Length=445, Percent_Identity=25.1685393258427, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI281360293, Length=233, Percent_Identity=26.6094420600858, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GABD_RHISN (P55653)

Other databases:

- EMBL:   U00090
- PIR:   S43963
- RefSeq:   NP_444062.1
- ProteinModelPortal:   P55653
- GeneID:   962447
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01630
- HOGENOM:   HBG752218
- ProtClustDB:   CLSK784552
- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102
- Gene3D:   G3DSA:3.40.309.10
- Gene3D:   G3DSA:3.40.605.10
- PANTHER:   PTHR11699
- TIGRFAMs:   TIGR01780

Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH

EC number: =1.2.1.79

Molecular weight: Translated: 53254; Mature: 53123

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: ACT_SITE 263-263 ACT_SITE 297-297 BINDING 264-264 BINDING 394-394

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTSALTRHLKCPELFRNLANEPHPSVAGQRQRFSVFNPSTGELLAEVPDMGAADAHAA
CCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHH
IERADAAQEPWSGLTARARSDILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
AYLQWYAEEANRIYGETISAPSTDRRMLVIKQPIGVVGAITPWNFPASMVARKISPALAA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCHHHHC
GCTVVLKPAEQTPLVAGAMFALAKLAGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFT
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEEC
GSTEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSA
CCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHCC
NRIYVQSGVYAEFAEKFTERVRTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGA
CEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCH
RVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLAPLLRFDDADHVVREANDTIY
HHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCHH
GLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDY
HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LDMKYLCVGGL
HCCHHHEECCC
>Mature Secondary Structure 
TLTSALTRHLKCPELFRNLANEPHPSVAGQRQRFSVFNPSTGELLAEVPDMGAADAHAA
CHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHH
IERADAAQEPWSGLTARARSDILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
AYLQWYAEEANRIYGETISAPSTDRRMLVIKQPIGVVGAITPWNFPASMVARKISPALAA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCHHHHC
GCTVVLKPAEQTPLVAGAMFALAKLAGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFT
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEEC
GSTEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSA
CCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHCC
NRIYVQSGVYAEFAEKFTERVRTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGA
CEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCH
RVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLAPLLRFDDADHVVREANDTIY
HHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCHH
GLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGVKQSGIGREGSRHGLEDY
HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LDMKYLCVGGL
HCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424