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Identifier: 16519928

GI number: 16519928

Start: 222210

End: 223400

Strand: Reverse

Name: Not Available

Synonym: NGR_a01770

Alternate gene names: NA

Gene position: 223400-222210 (Counterclockwise)

Preceding gene: 16519921

Following gene: 16519933

Centisome position: 41.67

GC content: 65.99

Gene sequence:

>1191_bases
ATGCTCGCTGCGAATGAACGACCTGAAGCGCCGACCGCTATCCGCATTGATCTTGGCGCAATCTTCGTCTCCTTGGAACT
CAGCCGTTCGAAATGGCTAATCACCTCGCTGTCGCCGGGCGGCGGCGAGAAGATGTCGAAACATGCGGTGGCGGCCGACG
ACATCGCCGGCCTGCTGGCGCGGTTTGCCGAGCTCAAGAGGAAGGCGCGGGCCCGGACCGGGCGCTACTTTCCCACCATC
GTGATCCAGGAGGCCGGGCTCGACGGCTTCTGGATCCACCGGGTGCTGCAGGCCGAGGGGATCGAAAGCCACGTCGTCGA
TCCGGCCCCGATTCCGACCTCGCGCCGGCGGCGGCGGGCCAAGACCGACAAGATCGACGGTGAGACGCTGGTGCGCGCGC
TGCTCGCCTATAAAAGGGGCGAGCCGCGCGTCTGTGCGATGCTGCGGGTGCCGACGCCCGAGGAGGAGGACCGTCGCCGC
ATCTCGCGTGAGCGCAAGGCGTTGACGAACGAGCGCGTACGCCACGTCAATCGCATCAAGGGCCTGCTGTTCAGCCAGGG
CGTCTCCGGCTACCAGCCGCTGCGCCGCGACCGGCGCACGCGGCTCGAGGAGCTGAGGACCGGCGACGGCCGACCATTGC
CGACGCATCTTAAGGCGCAGGTCGGCCGCGAACTCGATCGGCTGGAGCTGCTGATCGGACAGATCAAGGCAGTCGAGGTC
GAGCGCGACGCCATGCTCGCTGCCGCGCCGGTCGGCTCTGCGCATTTCGCTGATTGTGAGCAGCCGGCACCGGCGATGCT
GCTCGCCTTGAAAGGCATCGGGCCGGAGTTTGCCGCTGTCTTGTGGTCGGAGGGGCTGTCGCGTCATTTTGACAACCGAC
GACAGGTTGCCGCCTATGCCGGCCTTGCGCCGACACCCTGGCAGAGCGGCTCGGTCGATCACGACCAGGGGGTATCGAAA
GCCGGCAATCCAAGGCTGCGAACGACGCTGATCCAGGGGGCCTGGCTGTGGTTGCGCCATCAGCCGCACTCAGCGCTCAG
CCTGTGGTTCAAGCAGCGGGGGAAGCAGAACGATGGTCGTCTGAAGAAGAAGAAGACGATCGTGGCGCTCGCCTGCAAGC
TACTCGTCGCGCTGTGGAAATACGTCAATGCCGGCGTCGTCATCGAGGGGGCCGTGATGAAGACCCCCTGA

Upstream 100 bases:

>100_bases
CCAGTTCCTGATAGATCCTATGAGGAGAGGTGGATAGCGATCCGCGCTGTGACAAAGTGATGTCGCTTTCAATCAACACC
TTACTCTGGAGAGGCCGAAC

Downstream 100 bases:

>100_bases
TCCCGATCGCAACCGAAATTCTGCAATCTTCCAGGACCCGATCAGTCCTGGCGGATCTAGGTGGGACGAACCGCAGTTGA
GTATGGCTTCAAACGCCGCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLAANERPEAPTAIRIDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAADDIAGLLARFAELKRKARARTGRYFPTI
VIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRRRRAKTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRR
ISRERKALTNERVRHVNRIKGLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKAVEV
ERDAMLAAAPVGSAHFADCEQPAPAMLLALKGIGPEFAAVLWSEGLSRHFDNRRQVAAYAGLAPTPWQSGSVDHDQGVSK
AGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQNDGRLKKKKTIVALACKLLVALWKYVNAGVVIEGAVMKTP

Sequences:

>Translated_396_residues
MLAANERPEAPTAIRIDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAADDIAGLLARFAELKRKARARTGRYFPTI
VIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRRRRAKTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRR
ISRERKALTNERVRHVNRIKGLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKAVEV
ERDAMLAAAPVGSAHFADCEQPAPAMLLALKGIGPEFAAVLWSEGLSRHFDNRRQVAAYAGLAPTPWQSGSVDHDQGVSK
AGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQNDGRLKKKKTIVALACKLLVALWKYVNAGVVIEGAVMKTP
>Mature_396_residues
MLAANERPEAPTAIRIDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAADDIAGLLARFAELKRKARARTGRYFPTI
VIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRRRRAKTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRR
ISRERKALTNERVRHVNRIKGLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKAVEV
ERDAMLAAAPVGSAHFADCEQPAPAMLLALKGIGPEFAAVLWSEGLSRHFDNRRQVAAYAGLAPTPWQSGSVDHDQGVSK
AGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQNDGRLKKKKTIVALACKLLVALWKYVNAGVVIEGAVMKTP

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4RJ_RHISN (P55643)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444048.1
- GeneID:   962420
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01770
- HOGENOM:   HBG493403
- ProtClustDB:   CLSK543926
- InterPro:   IPR003346
- InterPro:   IPR002525

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9

EC number: NA

Molecular weight: Translated: 44082; Mature: 44082

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAANERPEAPTAIRIDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAADDIAGLLA
CCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RFAELKRKARARTGRYFPTIVIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRRRRA
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHH
KTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRRISRERKALTNERVRHVNRIK
HCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKAVEV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
ERDAMLAAAPVGSAHFADCEQPAPAMLLALKGIGPEFAAVLWSEGLSRHFDNRRQVAAYA
HHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHC
GLAPTPWQSGSVDHDQGVSKAGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQNDGR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCC
LKKKKTIVALACKLLVALWKYVNAGVVIEGAVMKTP
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCC
>Mature Secondary Structure
MLAANERPEAPTAIRIDLGAIFVSLELSRSKWLITSLSPGGGEKMSKHAVAADDIAGLLA
CCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RFAELKRKARARTGRYFPTIVIQEAGLDGFWIHRVLQAEGIESHVVDPAPIPTSRRRRRA
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHH
KTDKIDGETLVRALLAYKRGEPRVCAMLRVPTPEEEDRRRISRERKALTNERVRHVNRIK
HCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLFSQGVSGYQPLRRDRRTRLEELRTGDGRPLPTHLKAQVGRELDRLELLIGQIKAVEV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
ERDAMLAAAPVGSAHFADCEQPAPAMLLALKGIGPEFAAVLWSEGLSRHFDNRRQVAAYA
HHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHC
GLAPTPWQSGSVDHDQGVSKAGNPRLRTTLIQGAWLWLRHQPHSALSLWFKQRGKQNDGR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCC
LKKKKTIVALACKLLVALWKYVNAGVVIEGAVMKTP
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424