Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519933

GI number: 16519933

Start: 215928

End: 217784

Strand: Reverse

Name: Not Available

Synonym: NGR_a01720

Alternate gene names: 16519933

Gene position: 217784-215928 (Counterclockwise)

Preceding gene: 16519928

Following gene: 16519939

Centisome position: 40.62

GC content: 51.21

Gene sequence:

>1857_bases
ATGCCCAACGTCCAGAGTTTAGCGATTATTGTCACTGACCCGCGACTGATAATCTCGACTTGGAAAGATCGCTGTCCAGC
GCCGCTGAGCTCGGTCGGCGGCATGCCAATTCTTGCCCGCTTGGTCTCTCAATTGGCACAGGCGGGGGTACAAAAAACGA
TCGTGTTCGCATTAGATGGTATCGGCGACGTTAAACGTATTCTCAACAACCGCATGAAGCGCATGGAGCTCGTGATACGT
ATCATGCCGACCCCGGGCTCTGGTCGCCTTATAGATCTAGCAACTATTACGGAAATCGCTGAGTTCCACGGTCAAGTTTT
AGTGTTCACTGAGAACGCTGTCATCGATCCCTCACTGATTCAACGTTTATTGCGATCATCTGACCGCAATATCACGGTAG
TAAGCAGATCAGAACGCAGACGATGCTTGCGTTTATTGGGCGATATTGGAGGCCGTCTTACTGCCATGTTGCCCGGTGAC
TCTCCCATTCGAGAAAGTGCTTCTGCAGACGTTAGCCCCGTCGGGATCTATAAATTTGATCCCGCACTTCTCCGAGCGAT
TGCTCGTATCCGCCCCCATCGGTTTAATGACGATCTGGAGTTCTTCGAAACCGCTTTAGGGCTTCAACGCCATCAAATTT
ACTTGATGTATGCCGACCCTCAACACGTAAGGAGAGTGAATGATGCCACCGATCTTGAGGCGGCAAATTTTGCGTCTAGT
TCCAGCGGCGACCAGTTTAGTATACTTGAACGATTGCAAGCGGGGAACTGGCGATATCCAGCCAGTGAGCACATCTTGCT
CTGTAATCATCATTTTCCTCCAGCCTCAGTAGTCGACCGACTGCGCGAACGTTTGCAGGACCTGCTCTATCTTCAGCCCT
CCGACCAGCTCGATATTATAGCAAAGCTCTCGGAAATGACAGATCTTCCGGCTCGAAATCTTGCAGTTGGTAACGGCGTG
GGCGAGTTAATTAAAGCCCTCTACGGCTACCTCGATCCGAGAATCGTGATTCCAACCCCAACATCCGCGCAGTACATTGA
TGCCGTCGAACCAAATAAAGTGAGTCGTTTCGAGCTTCCGCCTGAGAACTTTGACTTAGACGTGGAGGCTTTCGCAAATT
TTGCAAAAAGGCGGCAAGCGTCCGTCGCTGTACTGGTCAACCCAAACAACCCAACAGGACGCTTGGTTCCCGTCCAGGAG
ATAGAATGGTTGGCGTCACAACTCGCTATAGAGAAGTGCCGGCTCGTGGTCGATGAGACGTTCATAGAGTTTTCAGTGGC
AGGGAAAGGAAATTCGGTAGAGAAGCTTCTCAGCGTTTTTCCAAAGATGGTCATTCTTAAAAGCCTAGGTGCGATAATGG
GCCTGGGAGGTGCCCAGATCGGCTATCTTGCTTCGAAAGACGAACAACTCACCCACGGAGTTCGCCGGCGGCTTCCGCTT
GGGAACATAAATGGCATCGCAGAATATCTCCTTTGGATTTTGCCAGAATTTCGCGAGGAGTGGGAAGCAAGCTTTCGTCG
CACTCGAGCAGACGTTGTGTCCTTCTCTCGAATGTTGGATACTATCCCGGAGCTTGAGGTCCACCCTTCCCAAGCAAACT
ACCTCTTCTGCAGAACTCCTGAGGCTTGGCCAAGTGCGAAGCATGTTGCCACGATGCTTGCGAAGCGATACGGCGTGTTG
GTCCAGAACTGTGAAAATCAGTGTATGAAGTATGGTGACCGATACCTGCGCTTGACTGTGCTACCCTATGAGGAGAATCG
TTACCTTGTGTCGGCACTCCGGCGGATTAATGAAGAACTGGTAGAATGGTCGACACAAAGTAAGCGCGCGGGTACGGCGT
ATCATTTGGGGTGCTGA

Upstream 100 bases:

>100_bases
CGTTAGTGGCGGTGCCGACCACATGCTTATCTTCTCGGTCAGCATGATCAAAGTTTGCACGTGATCTGGTAATGTTAGCC
CCCGCAATGCGAGTTGAAGA

Downstream 100 bases:

>100_bases
TCTTGAATTTTCTGCATGAGTCATGCGGAGAATCCTATGAGCGACAGTGTCAGTCAGCCGCGAACATTCGAGCTTTTGAC
GGCGGCGCCGGTGCGGGCGC

Product: hypothetical protein

Products: 2-Oxoglutarate; L-Histidinol phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIR
IMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGD
SPIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS
SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGV
GELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQE
IEWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL
GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVL
VQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC

Sequences:

>Translated_618_residues
MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIR
IMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGD
SPIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS
SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGV
GELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQE
IEWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL
GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVL
VQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC
>Mature_617_residues
PNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIRI
MPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDS
PIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASSS
SGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGVG
ELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEI
EWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPLG
NINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVLV
QNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC

Specific function: Histidine biosynthesis; seventh step. [C]

COG id: COG0079

COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Rhizobium NGR234A y4qD

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4RO_RHISN (P55648)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444053.1
- ProteinModelPortal:   P55648
- SMR:   P55648
- GeneID:   962422
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01720
- ProtClustDB:   CLSK506499
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.40.640.10
- Gene3D:   G3DSA:3.90.1150.10

Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major

EC number: 2.6.1.9 [C]

Molecular weight: Translated: 69344; Mature: 69213

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDG
CCCCCEEEEEEECCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHEEEEEEECC
IGDVKRILNNRMKRMELVIRIMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLI
CHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCHHHH
QRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDSPIRESASADVSPVGIYKFD
HHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCEEEECC
PALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS
HHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCCCCHHHCCCC
SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDII
CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHH
AKLSEMTDLPARNLAVGNGVGELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCEECCC
PENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEIEWLASQLAIEKCRLVVDET
CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
FIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECC
EAWPSAKHVATMLAKRYGVLVQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
VEWSTQSKRAGTAYHLGC
HHHCCCCCCCCCEEECCC
>Mature Secondary Structure 
PNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDG
CCCCEEEEEEECCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHEEEEEEECC
IGDVKRILNNRMKRMELVIRIMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLI
CHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCHHHH
QRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDSPIRESASADVSPVGIYKFD
HHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCEEEECC
PALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS
HHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCCCCHHHCCCC
SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDII
CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHH
AKLSEMTDLPARNLAVGNGVGELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCEECCC
PENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEIEWLASQLAIEKCRLVVDET
CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
FIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECC
EAWPSAKHVATMLAKRYGVLVQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
VEWSTQSKRAGTAYHLGC
HHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-Glutamate; 3-(Imidazol-4-yl)-2-oxopropyl phosphate [C]

Specific reaction: L-Glutamate + 3-(Imidazol-4-yl)-2-oxopropyl phosphate --> 2-Oxoglutarate + L-Histidinol phosphate [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424