Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519933
GI number: 16519933
Start: 215928
End: 217784
Strand: Reverse
Name: Not Available
Synonym: NGR_a01720
Alternate gene names: 16519933
Gene position: 217784-215928 (Counterclockwise)
Preceding gene: 16519928
Following gene: 16519939
Centisome position: 40.62
GC content: 51.21
Gene sequence:
>1857_bases ATGCCCAACGTCCAGAGTTTAGCGATTATTGTCACTGACCCGCGACTGATAATCTCGACTTGGAAAGATCGCTGTCCAGC GCCGCTGAGCTCGGTCGGCGGCATGCCAATTCTTGCCCGCTTGGTCTCTCAATTGGCACAGGCGGGGGTACAAAAAACGA TCGTGTTCGCATTAGATGGTATCGGCGACGTTAAACGTATTCTCAACAACCGCATGAAGCGCATGGAGCTCGTGATACGT ATCATGCCGACCCCGGGCTCTGGTCGCCTTATAGATCTAGCAACTATTACGGAAATCGCTGAGTTCCACGGTCAAGTTTT AGTGTTCACTGAGAACGCTGTCATCGATCCCTCACTGATTCAACGTTTATTGCGATCATCTGACCGCAATATCACGGTAG TAAGCAGATCAGAACGCAGACGATGCTTGCGTTTATTGGGCGATATTGGAGGCCGTCTTACTGCCATGTTGCCCGGTGAC TCTCCCATTCGAGAAAGTGCTTCTGCAGACGTTAGCCCCGTCGGGATCTATAAATTTGATCCCGCACTTCTCCGAGCGAT TGCTCGTATCCGCCCCCATCGGTTTAATGACGATCTGGAGTTCTTCGAAACCGCTTTAGGGCTTCAACGCCATCAAATTT ACTTGATGTATGCCGACCCTCAACACGTAAGGAGAGTGAATGATGCCACCGATCTTGAGGCGGCAAATTTTGCGTCTAGT TCCAGCGGCGACCAGTTTAGTATACTTGAACGATTGCAAGCGGGGAACTGGCGATATCCAGCCAGTGAGCACATCTTGCT CTGTAATCATCATTTTCCTCCAGCCTCAGTAGTCGACCGACTGCGCGAACGTTTGCAGGACCTGCTCTATCTTCAGCCCT CCGACCAGCTCGATATTATAGCAAAGCTCTCGGAAATGACAGATCTTCCGGCTCGAAATCTTGCAGTTGGTAACGGCGTG GGCGAGTTAATTAAAGCCCTCTACGGCTACCTCGATCCGAGAATCGTGATTCCAACCCCAACATCCGCGCAGTACATTGA TGCCGTCGAACCAAATAAAGTGAGTCGTTTCGAGCTTCCGCCTGAGAACTTTGACTTAGACGTGGAGGCTTTCGCAAATT TTGCAAAAAGGCGGCAAGCGTCCGTCGCTGTACTGGTCAACCCAAACAACCCAACAGGACGCTTGGTTCCCGTCCAGGAG ATAGAATGGTTGGCGTCACAACTCGCTATAGAGAAGTGCCGGCTCGTGGTCGATGAGACGTTCATAGAGTTTTCAGTGGC AGGGAAAGGAAATTCGGTAGAGAAGCTTCTCAGCGTTTTTCCAAAGATGGTCATTCTTAAAAGCCTAGGTGCGATAATGG GCCTGGGAGGTGCCCAGATCGGCTATCTTGCTTCGAAAGACGAACAACTCACCCACGGAGTTCGCCGGCGGCTTCCGCTT GGGAACATAAATGGCATCGCAGAATATCTCCTTTGGATTTTGCCAGAATTTCGCGAGGAGTGGGAAGCAAGCTTTCGTCG CACTCGAGCAGACGTTGTGTCCTTCTCTCGAATGTTGGATACTATCCCGGAGCTTGAGGTCCACCCTTCCCAAGCAAACT ACCTCTTCTGCAGAACTCCTGAGGCTTGGCCAAGTGCGAAGCATGTTGCCACGATGCTTGCGAAGCGATACGGCGTGTTG GTCCAGAACTGTGAAAATCAGTGTATGAAGTATGGTGACCGATACCTGCGCTTGACTGTGCTACCCTATGAGGAGAATCG TTACCTTGTGTCGGCACTCCGGCGGATTAATGAAGAACTGGTAGAATGGTCGACACAAAGTAAGCGCGCGGGTACGGCGT ATCATTTGGGGTGCTGA
Upstream 100 bases:
>100_bases CGTTAGTGGCGGTGCCGACCACATGCTTATCTTCTCGGTCAGCATGATCAAAGTTTGCACGTGATCTGGTAATGTTAGCC CCCGCAATGCGAGTTGAAGA
Downstream 100 bases:
>100_bases TCTTGAATTTTCTGCATGAGTCATGCGGAGAATCCTATGAGCGACAGTGTCAGTCAGCCGCGAACATTCGAGCTTTTGAC GGCGGCGCCGGTGCGGGCGC
Product: hypothetical protein
Products: 2-Oxoglutarate; L-Histidinol phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIR IMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGD SPIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGV GELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQE IEWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVL VQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC
Sequences:
>Translated_618_residues MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIR IMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGD SPIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGV GELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQE IEWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVL VQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC >Mature_617_residues PNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIRI MPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLIQRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDS PIRESASADVSPVGIYKFDPALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASSS SGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDIIAKLSEMTDLPARNLAVGNGVG ELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELPPENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEI EWLASQLAIEKCRLVVDETFIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPLG NINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTPEAWPSAKHVATMLAKRYGVLV QNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEELVEWSTQSKRAGTAYHLGC
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To Rhizobium NGR234A y4qD
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4RO_RHISN (P55648)
Other databases:
- EMBL: U00090 - RefSeq: NP_444053.1 - ProteinModelPortal: P55648 - SMR: P55648 - GeneID: 962422 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a01720 - ProtClustDB: CLSK506499 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: 2.6.1.9 [C]
Molecular weight: Translated: 69344; Mature: 69213
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDG CCCCCEEEEEEECCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHEEEEEEECC IGDVKRILNNRMKRMELVIRIMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLI CHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCHHHH QRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDSPIRESASADVSPVGIYKFD HHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCEEEECC PALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS HHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCCCCHHHCCCC SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDII CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHH AKLSEMTDLPARNLAVGNGVGELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCEECCC PENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEIEWLASQLAIEKCRLVVDET CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH FIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECC EAWPSAKHVATMLAKRYGVLVQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH VEWSTQSKRAGTAYHLGC HHHCCCCCCCCCEEECCC >Mature Secondary Structure PNVQSLAIIVTDPRLIISTWKDRCPAPLSSVGGMPILARLVSQLAQAGVQKTIVFALDG CCCCEEEEEEECCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHEEEEEEECC IGDVKRILNNRMKRMELVIRIMPTPGSGRLIDLATITEIAEFHGQVLVFTENAVIDPSLI CHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCHHHH QRLLRSSDRNITVVSRSERRRCLRLLGDIGGRLTAMLPGDSPIRESASADVSPVGIYKFD HHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCEEEECC PALLRAIARIRPHRFNDDLEFFETALGLQRHQIYLMYADPQHVRRVNDATDLEAANFASS HHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHHHCCCCCCCCHHHCCCC SSGDQFSILERLQAGNWRYPASEHILLCNHHFPPASVVDRLRERLQDLLYLQPSDQLDII CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHH AKLSEMTDLPARNLAVGNGVGELIKALYGYLDPRIVIPTPTSAQYIDAVEPNKVSRFELP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCEECCC PENFDLDVEAFANFAKRRQASVAVLVNPNNPTGRLVPVQEIEWLASQLAIEKCRLVVDET CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH FIEFSVAGKGNSVEKLLSVFPKMVILKSLGAIMGLGGAQIGYLASKDEQLTHGVRRRLPL EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC GNINGIAEYLLWILPEFREEWEASFRRTRADVVSFSRMLDTIPELEVHPSQANYLFCRTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECC EAWPSAKHVATMLAKRYGVLVQNCENQCMKYGDRYLRLTVLPYEENRYLVSALRRINEEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH VEWSTQSKRAGTAYHLGC HHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-Glutamate; 3-(Imidazol-4-yl)-2-oxopropyl phosphate [C]
Specific reaction: L-Glutamate + 3-(Imidazol-4-yl)-2-oxopropyl phosphate --> 2-Oxoglutarate + L-Histidinol phosphate [C]
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424