Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519853
GI number: 16519853
Start: 331702
End: 331923
Strand: Reverse
Name: Not Available
Synonym: NGR_a02520
Alternate gene names: NA
Gene position: 331923-331702 (Counterclockwise)
Preceding gene: 16519849
Following gene: 16519863
Centisome position: 61.91
GC content: 68.02
Gene sequence:
>222_bases ATGCCGGAGGTCTCTGAGCGTCGCGCCGAGGAGGCGCTGCTCGTCGCGCACTTCGTTGCCTGCGAGGGCAACCGCGTCAT CGCCTACTGCGCACTCGCTTCCGGTGCGGTAAAGCAGCCGAAGCGGCTGGCGGTTTCCGGCGCAATATGCCTGACCCGGT TCCGGGTGCCGTCCTCGGCCGCCTCGCAGTCGACCCTCCTATTAGGGTCGCGGCATCCGTAG
Upstream 100 bases:
>100_bases GTCCTGGACGCAAGCGTGCCGCTGAATATGCGCATCAAGCCTGCGGTCCGCAACCTGAGCCCGCGCTGCCGAGCTGCTTG GGAAGACACGCACTAATTTC
Downstream 100 bases:
>100_bases GGCATTGGTGCACGACGCAGGCCTGCGCCTGCTCCATGCTTTTGAAATCCTCGGCATTCGCGGTGTGCTGTTGCATGCGA TTTCCAGTGAGCGCGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPEVSERRAEEALLVAHFVACEGNRVIAYCALASGAVKQPKRLAVSGAICLTRFRVPSSAASQSTLLLGSRHP
Sequences:
>Translated_73_residues MPEVSERRAEEALLVAHFVACEGNRVIAYCALASGAVKQPKRLAVSGAICLTRFRVPSSAASQSTLLLGSRHP >Mature_72_residues PEVSERRAEEALLVAHFVACEGNRVIAYCALASGAVKQPKRLAVSGAICLTRFRVPSSAASQSTLLLGSRHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4MG_RHISN (P55566)
Other databases:
- EMBL: U00090 - RefSeq: NP_443973.1 - GeneID: 962365 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02520
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7750; Mature: 7619
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVSERRAEEALLVAHFVACEGNRVIAYCALASGAVKQPKRLAVSGAICLTRFRVPSSA CCCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCCCCCEEECCCCEEEEEECCCCCC ASQSTLLLGSRHP CCCEEEEEECCCC >Mature Secondary Structure PEVSERRAEEALLVAHFVACEGNRVIAYCALASGAVKQPKRLAVSGAICLTRFRVPSSA CCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCCCCCEEECCCCEEEEEECCCCCC ASQSTLLLGSRHP CCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424