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Identifier: 16519849

GI number: 16519849

Start: 335573

End: 336286

Strand: Reverse

Name: Not Available

Synonym: NGR_a02560

Alternate gene names: NA

Gene position: 336286-335573 (Counterclockwise)

Preceding gene: 16519848

Following gene: 16519853

Centisome position: 62.72

GC content: 54.34

Gene sequence:

>714_bases
ATGGTTTTTTCATTTTCCACGTTCAATCGGCTCGTCACCTTCACCGTCATGGCCGCCATCGTCAGCGTGCGGCCTTTGAC
GGCGGAAGACCTGTCCTCCCAGCAGCAGTGGCCGGGAACCCCCTTGTCACGAGTGGAAGCCCTTGCGGTTCTTCAGACTC
TAAACGCGAATCTCCTCAGCAATGCCAGTGCGACGCTCACGCTCGATCGCTGGTGTGAAGCGCATAGACTTGCACCACCC
GGTTCGAAGATCGTAGCAAAACATGTACAGGGACACGACAAGCCAGCTAACGTTCATATTCGTAAATTGCTGCACGTCGG
GCCTAACGAGCCGATCGTCTATCGCCATGTCCGCCTAGCATGCGGTGATCGCATCCTTTCGGAAGCAGACAACTGGTATG
TACCCGCAAGATTGACAGCGGAGATGAACGAGGTGCTGAATACGACTGATATCTCGTTTGGTCGAGCCGTTCGATCCTTG
AACTTCACCCGAACCAACCTAACGGCCAGACTGCTTTGGTCCCCTCTTCCGGAAGGCTGGGACATGTCAGCCGAATTACC
AGTGTCGAGCTCAGGGCCCTTGATTCCACCGCCATTCCTTCTCGAACATCATGCGGTGCTAAAGTTGCAAGATGGCACGC
CTTTTAGTGCCGTGGTCGAAAGCTATACGAACAATGTGCTCGATTTTCCGGCTCCGCTGCTATATCCGCAATAA

Upstream 100 bases:

>100_bases
CATGTCGCTGCTTTGCGCGACGAACGGCTGGCTTGCCTGCAAAAGCTCAGAAAAAAAGGCCACGAAGTTCGTAAGTCTGC
AGTAAAGGAGTTTCATTTCC

Downstream 100 bases:

>100_bases
AGCCTAGTGGATTGGCTGGCGACTCGGCGTTAGCACGGAATCCGATTGAAGCCGGACGCCATTCGGATCGGACACCGGAC
AGGATTCGGATTGTGCCGAG

Product: precursor of 26.2 kDa for periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MVFSFSTFNRLVTFTVMAAIVSVRPLTAEDLSSQQQWPGTPLSRVEALAVLQTLNANLLSNASATLTLDRWCEAHRLAPP
GSKIVAKHVQGHDKPANVHIRKLLHVGPNEPIVYRHVRLACGDRILSEADNWYVPARLTAEMNEVLNTTDISFGRAVRSL
NFTRTNLTARLLWSPLPEGWDMSAELPVSSSGPLIPPPFLLEHHAVLKLQDGTPFSAVVESYTNNVLDFPAPLLYPQ

Sequences:

>Translated_237_residues
MVFSFSTFNRLVTFTVMAAIVSVRPLTAEDLSSQQQWPGTPLSRVEALAVLQTLNANLLSNASATLTLDRWCEAHRLAPP
GSKIVAKHVQGHDKPANVHIRKLLHVGPNEPIVYRHVRLACGDRILSEADNWYVPARLTAEMNEVLNTTDISFGRAVRSL
NFTRTNLTARLLWSPLPEGWDMSAELPVSSSGPLIPPPFLLEHHAVLKLQDGTPFSAVVESYTNNVLDFPAPLLYPQ
>Mature_237_residues
MVFSFSTFNRLVTFTVMAAIVSVRPLTAEDLSSQQQWPGTPLSRVEALAVLQTLNANLLSNASATLTLDRWCEAHRLAPP
GSKIVAKHVQGHDKPANVHIRKLLHVGPNEPIVYRHVRLACGDRILSEADNWYVPARLTAEMNEVLNTTDISFGRAVRSL
NFTRTNLTARLLWSPLPEGWDMSAELPVSSSGPLIPPPFLLEHHAVLKLQDGTPFSAVVESYTNNVLDFPAPLLYPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4MC_RHISN (P55562)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443969.1
- ProteinModelPortal:   P55562
- GeneID:   962364
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02560
- HOGENOM:   HBG660027
- ProtClustDB:   CLSK861950

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26205; Mature: 26205

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSFSTFNRLVTFTVMAAIVSVRPLTAEDLSSQQQWPGTPLSRVEALAVLQTLNANLLS
CEECHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NASATLTLDRWCEAHRLAPPGSKIVAKHVQGHDKPANVHIRKLLHVGPNEPIVYRHVRLA
CCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHH
CGDRILSEADNWYVPARLTAEMNEVLNTTDISFGRAVRSLNFTRTNLTARLLWSPLPEGW
HHHHHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHEEEEHCCCCCCCC
DMSAELPVSSSGPLIPPPFLLEHHAVLKLQDGTPFSAVVESYTNNVLDFPAPLLYPQ
CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVFSFSTFNRLVTFTVMAAIVSVRPLTAEDLSSQQQWPGTPLSRVEALAVLQTLNANLLS
CEECHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NASATLTLDRWCEAHRLAPPGSKIVAKHVQGHDKPANVHIRKLLHVGPNEPIVYRHVRLA
CCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHH
CGDRILSEADNWYVPARLTAEMNEVLNTTDISFGRAVRSLNFTRTNLTARLLWSPLPEGW
HHHHHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHEEEEHCCCCCCCC
DMSAELPVSSSGPLIPPPFLLEHHAVLKLQDGTPFSAVVESYTNNVLDFPAPLLYPQ
CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424