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Identifier: 16519794

GI number: 16519794

Start: 400457

End: 401992

Strand: Reverse

Name: Not Available

Synonym: NGR_a03120

Alternate gene names: NA

Gene position: 401992-400457 (Counterclockwise)

Preceding gene: 16519793

Following gene: 16519795

Centisome position: 74.98

GC content: 61.33

Gene sequence:

>1536_bases
ATGTCTCTTCGCCACGAACAGCTCCCGCAAGATGTCGAGCAACTGAGCAGGATGGTCCTCGATCTGAGGGCGGAGGTCGC
CTACCTGAAGCGGCTGATCCACGGCGCAAGATCAGAGGTGCTTTCGACGATCGATCCGACGCAGACCAGTCTTGATCTCG
GCGATCTTTCGACTGTTCCGGTCGCCGCCAACGACGACCAGCCTGACGGTTCCCGGCAGAGTGTGCGTGGCCGGCAATCC
GCAGCCCGCAATATCGGCTTTCTTCCGAAGCACCTGCCGCGCTACGACGTGATTATCGAGCCGGAAAGCCGCGCGTGCGC
CTGTTGCTCCGGCGCGCTTCACCGCATTGGAGAGACGACAAGCGAAGCGCTCGATATCGTTCCGGCCATCTTGCGCGTCA
AACGAACCATTCGCCCTCGCTATGCCTGCCGGGCATGTGAGAATGGTGTCATGCAGGCGCCCGCACCGGCGCGCTTCATG
GATGGCGGCATGGCGACGACGGCATTGGCCGCCCATATCGTCGTCTCCAAGTTCGCATGGCACTTGCCACTCTACCGGCA
AGCCCAGATCTTCGCAGGCTATGGAATAACCCTCGATCGCGGAACGCTCGGCATCTGGGGCACGCGTGTAGCCTGGTGGC
TGAAGCCCCTCTACGACAGGCTGCTGGCCTTCATTCGCTCGCAGCCAAGGGTCTTTTCCGATGAGACCCGATTACCGCGG
CTTGACCCGGGGCGAAAGAGAACGAAAGTCTGCCAGCTGTGGGCGCAGGCGGTGGACGACCGCCCCTGGAAAGGACCGGC
CCCGCCGGCGGTCGGTTACATCTTCTCCGAGAGCCGCAGCGCCCGTGAGGCGGAACGCCAACTGGCATCCTTCAACGGCG
TTCTTCAGGTGGATGGGTATACCGCCTACAAGACGCTTGCCAGACATCGCGGCAAGAGCAATTCCAGTCCCTTGAGGCTG
GCGTTCTGCCTGGCCCACGCCCGGCGTAAATTCGTCGATGTGGTCAAGTTGACCGGATCGCCGGAGGCGCTGGAGATCGT
ATCGATCCTCGCCGAGGTCTACCAGATCGAACGGGAGATCAGGGGGCAAAGCGCCGAGGATCGTCAGAATGCCCGCCAGC
TCCGCTCCGCTCCCGTCATGCGCCAGTTGAAGGCGCGCCTGCTCGACCTGAAGAACGACATCTCAACGCAGTCCGCCCTC
GCCAAAGCCATCAAATACACGCTCGCGCATTGGACGGGCCTGAACGCTTTCCTGGACGATGGAACGATAGAGGTTGACTC
CAACATCGTTGAGCGTTCGATGAAGTCCGTTGCCCTGACGAGGAAGAATTCGATGTTCGTAGGCAATGTCCAGGGCGGTG
AGACCTTCGCGGTTCTGGCCTCGTTGATCAACTCGGCCAAATTGAGCGGGCTGGATCCGTACGCCTGGCTTGCCGATGTT
CTCGAACGGATCGTATCGGGCAGCACGACGATCAACCAGCTCGAGACGCTGCTGCCTTGGAATTGGAAAGCCGATCAGGT
CGGTCAAGCCGCATGA

Upstream 100 bases:

>100_bases
CTGGACACGCGTCAAGCGCAAGCCCGTGAAGCGACCAACGAAAGTGGCTTGATCTCATTGTATTTCCTTGCAGATTCACG
CCCGTGTGGTAGCTTTCGGC

Downstream 100 bases:

>100_bases
CCCGGCCAGCCGTTTCCTATGACGAACTCGATGAGTACCTTCGTGGCGATGGACACAACGACTATGTCGGAGTGAGCGCC
ATCGATGGGCTGATCGCGGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSLRHEQLPQDVEQLSRMVLDLRAEVAYLKRLIHGARSEVLSTIDPTQTSLDLGDLSTVPVAANDDQPDGSRQSVRGRQS
AARNIGFLPKHLPRYDVIIEPESRACACCSGALHRIGETTSEALDIVPAILRVKRTIRPRYACRACENGVMQAPAPARFM
DGGMATTALAAHIVVSKFAWHLPLYRQAQIFAGYGITLDRGTLGIWGTRVAWWLKPLYDRLLAFIRSQPRVFSDETRLPR
LDPGRKRTKVCQLWAQAVDDRPWKGPAPPAVGYIFSESRSAREAERQLASFNGVLQVDGYTAYKTLARHRGKSNSSPLRL
AFCLAHARRKFVDVVKLTGSPEALEIVSILAEVYQIEREIRGQSAEDRQNARQLRSAPVMRQLKARLLDLKNDISTQSAL
AKAIKYTLAHWTGLNAFLDDGTIEVDSNIVERSMKSVALTRKNSMFVGNVQGGETFAVLASLINSAKLSGLDPYAWLADV
LERIVSGSTTINQLETLLPWNWKADQVGQAA

Sequences:

>Translated_511_residues
MSLRHEQLPQDVEQLSRMVLDLRAEVAYLKRLIHGARSEVLSTIDPTQTSLDLGDLSTVPVAANDDQPDGSRQSVRGRQS
AARNIGFLPKHLPRYDVIIEPESRACACCSGALHRIGETTSEALDIVPAILRVKRTIRPRYACRACENGVMQAPAPARFM
DGGMATTALAAHIVVSKFAWHLPLYRQAQIFAGYGITLDRGTLGIWGTRVAWWLKPLYDRLLAFIRSQPRVFSDETRLPR
LDPGRKRTKVCQLWAQAVDDRPWKGPAPPAVGYIFSESRSAREAERQLASFNGVLQVDGYTAYKTLARHRGKSNSSPLRL
AFCLAHARRKFVDVVKLTGSPEALEIVSILAEVYQIEREIRGQSAEDRQNARQLRSAPVMRQLKARLLDLKNDISTQSAL
AKAIKYTLAHWTGLNAFLDDGTIEVDSNIVERSMKSVALTRKNSMFVGNVQGGETFAVLASLINSAKLSGLDPYAWLADV
LERIVSGSTTINQLETLLPWNWKADQVGQAA
>Mature_510_residues
SLRHEQLPQDVEQLSRMVLDLRAEVAYLKRLIHGARSEVLSTIDPTQTSLDLGDLSTVPVAANDDQPDGSRQSVRGRQSA
ARNIGFLPKHLPRYDVIIEPESRACACCSGALHRIGETTSEALDIVPAILRVKRTIRPRYACRACENGVMQAPAPARFMD
GGMATTALAAHIVVSKFAWHLPLYRQAQIFAGYGITLDRGTLGIWGTRVAWWLKPLYDRLLAFIRSQPRVFSDETRLPRL
DPGRKRTKVCQLWAQAVDDRPWKGPAPPAVGYIFSESRSAREAERQLASFNGVLQVDGYTAYKTLARHRGKSNSSPLRLA
FCLAHARRKFVDVVKLTGSPEALEIVSILAEVYQIEREIRGQSAEDRQNARQLRSAPVMRQLKARLLDLKNDISTQSALA
KAIKYTLAHWTGLNAFLDDGTIEVDSNIVERSMKSVALTRKNSMFVGNVQGGETFAVLASLINSAKLSGLDPYAWLADVL
ERIVSGSTTINQLETLLPWNWKADQVGQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JD_RHISN (P55504)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443914.1
- GeneID:   962582
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03120
- HOGENOM:   HBG741435
- ProtClustDB:   CLSK2518393
- InterPro:   IPR004291

Pfam domain/function: PF03050 Transposase_25

EC number: NA

Molecular weight: Translated: 56703; Mature: 56571

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRHEQLPQDVEQLSRMVLDLRAEVAYLKRLIHGARSEVLSTIDPTQTSLDLGDLSTVP
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VAANDDQPDGSRQSVRGRQSAARNIGFLPKHLPRYDVIIEPESRACACCSGALHRIGETT
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH
SEALDIVPAILRVKRTIRPRYACRACENGVMQAPAPARFMDGGMATTALAAHIVVSKFAW
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
HLPLYRQAQIFAGYGITLDRGTLGIWGTRVAWWLKPLYDRLLAFIRSQPRVFSDETRLPR
HCCHHHHHHEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LDPGRKRTKVCQLWAQAVDDRPWKGPAPPAVGYIFSESRSAREAERQLASFNGVLQVDGY
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEECCH
TAYKTLARHRGKSNSSPLRLAFCLAHARRKFVDVVKLTGSPEALEIVSILAEVYQIEREI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RGQSAEDRQNARQLRSAPVMRQLKARLLDLKNDISTQSALAKAIKYTLAHWTGLNAFLDD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCC
GTIEVDSNIVERSMKSVALTRKNSMFVGNVQGGETFAVLASLINSAKLSGLDPYAWLADV
CCEEECHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
LERIVSGSTTINQLETLLPWNWKADQVGQAA
HHHHHCCCCHHHHHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure 
SLRHEQLPQDVEQLSRMVLDLRAEVAYLKRLIHGARSEVLSTIDPTQTSLDLGDLSTVP
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VAANDDQPDGSRQSVRGRQSAARNIGFLPKHLPRYDVIIEPESRACACCSGALHRIGETT
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH
SEALDIVPAILRVKRTIRPRYACRACENGVMQAPAPARFMDGGMATTALAAHIVVSKFAW
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
HLPLYRQAQIFAGYGITLDRGTLGIWGTRVAWWLKPLYDRLLAFIRSQPRVFSDETRLPR
HCCHHHHHHEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LDPGRKRTKVCQLWAQAVDDRPWKGPAPPAVGYIFSESRSAREAERQLASFNGVLQVDGY
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEECCH
TAYKTLARHRGKSNSSPLRLAFCLAHARRKFVDVVKLTGSPEALEIVSILAEVYQIEREI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RGQSAEDRQNARQLRSAPVMRQLKARLLDLKNDISTQSALAKAIKYTLAHWTGLNAFLDD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCC
GTIEVDSNIVERSMKSVALTRKNSMFVGNVQGGETFAVLASLINSAKLSGLDPYAWLADV
CCEEECHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
LERIVSGSTTINQLETLLPWNWKADQVGQAA
HHHHHCCCCHHHHHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424