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Identifier: 16519795

GI number: 16519795

Start: 399639

End: 400460

Strand: Reverse

Name: Not Available

Synonym: NGR_a03110

Alternate gene names: 16519795

Gene position: 400460-399639 (Counterclockwise)

Preceding gene: 16519794

Following gene: 16519800

Centisome position: 74.69

GC content: 60.1

Gene sequence:

>822_bases
ATGACCCGGCCAGCCGTTTCCTATGACGAACTCGATGAGTACCTTCGTGGCGATGGACACAACGACTATGTCGGAGTGAG
CGCCATCGATGGGCTGATCGCGGCCGTCGTGGCCGGCCCGGTGACGATCCTTCCGGATATCTGGTTGCCGCACGTATTCG
GGGGATCAATGCCGCAAGCCAGGCCGGGCTCGATCGAGGAGCGGCTCGTCAATACGGTGCTCAACCGTCACGATGAAGTG
GAAAGCCTGCTGCGCGACGCCCCCGGGCACTACTATCCGATCTTCATGAACCACAAAGGCAAGACCATCGTCGGTCCTTG
GGCGATCGGGTTCTCCCTTGGACTCAGTCTGGGCGGCGAGGCTTGGGCGCCGATTGCTGGCAATGCCAAAGCCAGTGATC
TCCCCCATCATGGCCGTCAATCCGCAGCTGGCCAAACTGCTCATCCGGCTTTCTCCTCAGGAGCGGCGGAAATTGAGAGC
AACCGCTCATCATCACATCACATCCGCAGTCCTGCAGTTGCACGCCATCACAAGACAGGCCCGATAACAACGCAGCCACC
GGCACAAACGCAACCTTACCGCAAGACGGCGTGTTCGTTGCGCTTACAGTGCACCAGATCTGTCGAGCACGACACGCAGG
CTCGAGGGGGACCCTGCATCCCCGGCGTTTCAGGTCTCAAACTTGGATTACGCCCCGCGGACCGATGGTCGGGCTGCCGT
TGGGAACATGTCGTAGCTTATCTCGGATCTCCATTATACGAGAGTACAAGCACATGCGCGGAGGGCGCCGATCGCCAACT
CCTCGTGTTGCGTGAGGACTGA

Upstream 100 bases:

>100_bases
CCGATGTTCTCGAACGGATCGTATCGGGCAGCACGACGATCAACCAGCTCGAGACGCTGCTGCCTTGGAATTGGAAAGCC
GATCAGGTCGGTCAAGCCGC

Downstream 100 bases:

>100_bases
TCGGGTCAAACTCACGACCGCAGCGCCCAAGCGCAAACGTCGGTCGGGAGTAGATTGAAATATTGCAAATCTCTCACTGC
TGCCGTAAGCCGTCTGGAGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTRPAVSYDELDEYLRGDGHNDYVGVSAIDGLIAAVVAGPVTILPDIWLPHVFGGSMPQARPGSIEERLVNTVLNRHDEV
ESLLRDAPGHYYPIFMNHKGKTIVGPWAIGFSLGLSLGGEAWAPIAGNAKASDLPHHGRQSAAGQTAHPAFSSGAAEIES
NRSSSHHIRSPAVARHHKTGPITTQPPAQTQPYRKTACSLRLQCTRSVEHDTQARGGPCIPGVSGLKLGLRPADRWSGCR
WEHVVAYLGSPLYESTSTCAEGADRQLLVLRED

Sequences:

>Translated_273_residues
MTRPAVSYDELDEYLRGDGHNDYVGVSAIDGLIAAVVAGPVTILPDIWLPHVFGGSMPQARPGSIEERLVNTVLNRHDEV
ESLLRDAPGHYYPIFMNHKGKTIVGPWAIGFSLGLSLGGEAWAPIAGNAKASDLPHHGRQSAAGQTAHPAFSSGAAEIES
NRSSSHHIRSPAVARHHKTGPITTQPPAQTQPYRKTACSLRLQCTRSVEHDTQARGGPCIPGVSGLKLGLRPADRWSGCR
WEHVVAYLGSPLYESTSTCAEGADRQLLVLRED
>Mature_272_residues
TRPAVSYDELDEYLRGDGHNDYVGVSAIDGLIAAVVAGPVTILPDIWLPHVFGGSMPQARPGSIEERLVNTVLNRHDEVE
SLLRDAPGHYYPIFMNHKGKTIVGPWAIGFSLGLSLGGEAWAPIAGNAKASDLPHHGRQSAAGQTAHPAFSSGAAEIESN
RSSSHHIRSPAVARHHKTGPITTQPPAQTQPYRKTACSLRLQCTRSVEHDTQARGGPCIPGVSGLKLGLRPADRWSGCRW
EHVVAYLGSPLYESTSTCAEGADRQLLVLRED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JE_RHISN (P55505)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443915.1
- GeneID:   962510
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03110
- ProtClustDB:   CLSK516100
- InterPro:   IPR011978
- TIGRFAMs:   TIGR02292

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 29355; Mature: 29224

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc65f3d0)-; HASH(0xc28b204)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPAVSYDELDEYLRGDGHNDYVGVSAIDGLIAAVVAGPVTILPDIWLPHVFGGSMPQA
CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCC
RPGSIEERLVNTVLNRHDEVESLLRDAPGHYYPIFMNHKGKTIVGPWAIGFSLGLSLGGE
CCCHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCC
AWAPIAGNAKASDLPHHGRQSAAGQTAHPAFSSGAAEIESNRSSSHHIRSPAVARHHKTG
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCC
PITTQPPAQTQPYRKTACSLRLQCTRSVEHDTQARGGPCIPGVSGLKLGLRPADRWSGCR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCC
WEHVVAYLGSPLYESTSTCAEGADRQLLVLRED
HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECH
>Mature Secondary Structure 
TRPAVSYDELDEYLRGDGHNDYVGVSAIDGLIAAVVAGPVTILPDIWLPHVFGGSMPQA
CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCC
RPGSIEERLVNTVLNRHDEVESLLRDAPGHYYPIFMNHKGKTIVGPWAIGFSLGLSLGGE
CCCHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCC
AWAPIAGNAKASDLPHHGRQSAAGQTAHPAFSSGAAEIESNRSSSHHIRSPAVARHHKTG
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCC
PITTQPPAQTQPYRKTACSLRLQCTRSVEHDTQARGGPCIPGVSGLKLGLRPADRWSGCR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCC
WEHVVAYLGSPLYESTSTCAEGADRQLLVLRED
HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424