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Identifier: 16519741

GI number: 16519741

Start: 468903

End: 470081

Strand: Reverse

Name: Not Available

Synonym: NGR_a03650

Alternate gene names: 16519741

Gene position: 470081-468903 (Counterclockwise)

Preceding gene: 16519727

Following gene: 16519742

Centisome position: 87.67

GC content: 61.07

Gene sequence:

>1179_bases
ATGCCTGTTTTGCCCGAGCTCTCCCTCAATGAACGACGCCTCGTCGAGTTGATCTTCAAGAACAGGGGCGTGGCTCGCAT
CGAGTTGGCGCAGATGTCCGGGATGACCGGCGCCACCGTGACGCGTCTGGTTGCGAGTTTGCTGGATCTCGGCCTGATCA
CCGAGGAGGCGGATCGAAGCGGAGCGCAAGGCCAGCCACGCCGGTTGCTGCAGCTCCAGGCCCGCCGTTTCTTTGCCGCC
GGCGTCACCTTTTCGGTGACCCGCATGGAAGTCGTCATTATCGATCTCAGCGGCTCGATCGTGGCAACGAGAAGCGTGGA
GGTTCATACGGCAAGTCCAATGGAAGTGGTGGAGGCGGCTCAGGCTGCCGTCGATGACATGCTCGCCGCCTTATCCATCC
AGAAGAACGACCTTGTCGGAATTGGCGTTTCCGTTCCGGGAAATTTTGGCACCGCCTCGAACCTGTTGAAAGCCCATCCC
TTCTTTCCTGCGTTCGAAGACGGCCAGGCGATCGAAGCGTTCCGTGAGGCGTTCGACGTCCCATGCCATGTCGAAAACGA
CGGCACGGCTGCCGCACTTGGCGAATACGTGTTCGCGGGTGACAACGTGCTGGATGATCCGCTGTTCTTCATCCACATCG
GCCATGGCGTCGGCGGCGGCGCGGTGATCGACGGCAGACCTTATGGCGGCGCGCACGGCAATGCTTGCCTGCCGGGTGTC
CTCTATCCCTACGATCAGCCGCGGCCGTCCGGGCAGGACCTTCTCGCGACGTTGCACGCGGCCGGTTTCCATCTTCGAGA
TTTCGAGGAGATGGACGCGATGCCTCAGGCCGCTCGCTCCACCGTTATCGAATGGATCACGCGCGCTGGCGCGCAGCTCC
GGCAAGCCGTCCGTGTCGCAACAGCATTTTTCGATCCCGCGCGTATTGTCGTAGGTGGGCGGTTACCCGGCGATCTGAAT
AAAAGGCTTGTTGAAACGATCCTGTCTGAGCCGATAGAAGGACCATCGCGAGGTCTGCCGACCGCTCCGGTTTCCGTATC
TCGACTTGGCATTCGCGCCGGCGCCGTTGGTGCCGGCTGTGTTCCGTTCTTCAGAGCATTTTTTACGGGTGCCGTCGCCA
ATGGTGGAAGCGCCTACCTGAACGGTAGACGACCTTTTCCTCGGACTCCCGCCCAATAG

Upstream 100 bases:

>100_bases
CTCCTCTTACGCCGGCTCCATGTCAGTTTAATTACATTGCGCAATTTAATTTTCCTTGCAATAGCTTTCCTGAAACTTCG
ACCGATTTGCGGACTTTGCC

Downstream 100 bases:

>100_bases
TTCCGTGCCGGAACACGCAACGCTACCACAGCCCCAAGCTGTGCAGCCGGAAGCTGTTGCACATGAGGCCGACTCGTCAG
GAAATCCCGCGCAAGACATG

Product: transcription regulator of the ROK-family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPVLPELSLNERRLVELIFKNRGVARIELAQMSGMTGATVTRLVASLLDLGLITEEADRSGAQGQPRRLLQLQARRFFAA
GVTFSVTRMEVVIIDLSGSIVATRSVEVHTASPMEVVEAAQAAVDDMLAALSIQKNDLVGIGVSVPGNFGTASNLLKAHP
FFPAFEDGQAIEAFREAFDVPCHVENDGTAAALGEYVFAGDNVLDDPLFFIHIGHGVGGGAVIDGRPYGGAHGNACLPGV
LYPYDQPRPSGQDLLATLHAAGFHLRDFEEMDAMPQAARSTVIEWITRAGAQLRQAVRVATAFFDPARIVVGGRLPGDLN
KRLVETILSEPIEGPSRGLPTAPVSVSRLGIRAGAVGAGCVPFFRAFFTGAVANGGSAYLNGRRPFPRTPAQ

Sequences:

>Translated_392_residues
MPVLPELSLNERRLVELIFKNRGVARIELAQMSGMTGATVTRLVASLLDLGLITEEADRSGAQGQPRRLLQLQARRFFAA
GVTFSVTRMEVVIIDLSGSIVATRSVEVHTASPMEVVEAAQAAVDDMLAALSIQKNDLVGIGVSVPGNFGTASNLLKAHP
FFPAFEDGQAIEAFREAFDVPCHVENDGTAAALGEYVFAGDNVLDDPLFFIHIGHGVGGGAVIDGRPYGGAHGNACLPGV
LYPYDQPRPSGQDLLATLHAAGFHLRDFEEMDAMPQAARSTVIEWITRAGAQLRQAVRVATAFFDPARIVVGGRLPGDLN
KRLVETILSEPIEGPSRGLPTAPVSVSRLGIRAGAVGAGCVPFFRAFFTGAVANGGSAYLNGRRPFPRTPAQ
>Mature_391_residues
PVLPELSLNERRLVELIFKNRGVARIELAQMSGMTGATVTRLVASLLDLGLITEEADRSGAQGQPRRLLQLQARRFFAAG
VTFSVTRMEVVIIDLSGSIVATRSVEVHTASPMEVVEAAQAAVDDMLAALSIQKNDLVGIGVSVPGNFGTASNLLKAHPF
FPAFEDGQAIEAFREAFDVPCHVENDGTAAALGEYVFAGDNVLDDPLFFIHIGHGVGGGAVIDGRPYGGAHGNACLPGVL
YPYDQPRPSGQDLLATLHAAGFHLRDFEEMDAMPQAARSTVIEWITRAGAQLRQAVRVATAFFDPARIVVGGRLPGDLNK
RLVETILSEPIEGPSRGLPTAPVSVSRLGIRAGAVGAGCVPFFRAFFTGAVANGGSAYLNGRRPFPRTPAQ

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family

Homologues:

Organism=Escherichia coli, GI1786891, Length=338, Percent_Identity=24.5562130177515, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787878, Length=367, Percent_Identity=21.7983651226158, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FQ_RHISN (P55455)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443861.1
- ProteinModelPortal:   P55455
- GeneID:   962305
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03650
- GO:   GO:0005622
- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF00480 ROK

EC number: NA

Molecular weight: Translated: 41576; Mature: 41445

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00042 HTH_CRP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLPELSLNERRLVELIFKNRGVARIELAQMSGMTGATVTRLVASLLDLGLITEEADRS
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GAQGQPRRLLQLQARRFFAAGVTFSVTRMEVVIIDLSGSIVATRSVEVHTASPMEVVEAA
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEEECCCHHHHHHHH
QAAVDDMLAALSIQKNDLVGIGVSVPGNFGTASNLLKAHPFFPAFEDGQAIEAFREAFDV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
PCHVENDGTAAALGEYVFAGDNVLDDPLFFIHIGHGVGGGAVIDGRPYGGAHGNACLPGV
CEEECCCCCHHHHHCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCE
LYPYDQPRPSGQDLLATLHAAGFHLRDFEEMDAMPQAARSTVIEWITRAGAQLRQAVRVA
ECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFFDPARIVVGGRLPGDLNKRLVETILSEPIEGPSRGLPTAPVSVSRLGIRAGAVGAGC
HHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCEECCCCCCCH
VPFFRAFFTGAVANGGSAYLNGRRPFPRTPAQ
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
PVLPELSLNERRLVELIFKNRGVARIELAQMSGMTGATVTRLVASLLDLGLITEEADRS
CCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GAQGQPRRLLQLQARRFFAAGVTFSVTRMEVVIIDLSGSIVATRSVEVHTASPMEVVEAA
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEEECCCHHHHHHHH
QAAVDDMLAALSIQKNDLVGIGVSVPGNFGTASNLLKAHPFFPAFEDGQAIEAFREAFDV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
PCHVENDGTAAALGEYVFAGDNVLDDPLFFIHIGHGVGGGAVIDGRPYGGAHGNACLPGV
CEEECCCCCHHHHHCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCE
LYPYDQPRPSGQDLLATLHAAGFHLRDFEEMDAMPQAARSTVIEWITRAGAQLRQAVRVA
ECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAFFDPARIVVGGRLPGDLNKRLVETILSEPIEGPSRGLPTAPVSVSRLGIRAGAVGAGC
HHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCEECCCCCCCH
VPFFRAFFTGAVANGGSAYLNGRRPFPRTPAQ
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424