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Identifier: 16519727

GI number: 16519727

Start: 484483

End: 486477

Strand: Reverse

Name: Not Available

Synonym: NGR_a03790

Alternate gene names: NA

Gene position: 486477-484483 (Counterclockwise)

Preceding gene: 16519723

Following gene: 16519741

Centisome position: 90.73

GC content: 59.3

Gene sequence:

>1995_bases
ATGGAAATCTCCAAATTTGCGGACGAACAACTGGCCGATCAGATCGCCGCAGGCCGCGAGGCTGTGCCCGAAGTTGATCC
CATACGGTTGATTGAGCAGGTCGTCCATCGGGCGCGCGCTGGGGCCGGGGTGGATTTCGACGTCTTTGAGTCCCTGATCG
GCGAAATCGATCTCGTCGAAATCAACTATCTCGAGCGTGGTTTGATGGCATCAAGGGCGGTGTGCAGGATCAATGTTCCG
GCACCCGTTGGCGACAGTAGCGACTGGGGGACAGGGTTCTTGATCGGGCCGCGGCTCTTGTTGACCAACAATCACGTCAT
CGACTCCGCTGAAGACGCTCTCAAGGCTACGGTCGAATTCGGCTACGAACTCGACGCCGAAGGGCGGCTGAAACGCACGA
CACGCTTTCGGCTTTCCCCGCAAGATGGTTTTGTAACGAGCCCGAGGGATGCGCTCGATTACACGGTCGTTGCGATCGAG
GAAAACAGCGAGGATGGCGCGACGCCAATCTCCGACTTCGGTTTCTTGCGTCTCGACGCGCGCACCGGAAAGACGGAGGT
CGGCCAGTATGCGACCATCATTCAACATCCCGATGCCAAGACGAAGCGCATCTCGCTCAGAGAAAACAAGTTCGTCAAAT
ATGGGGACGAGGCGGACCCGGAGCGCGACAATTTCCTCTGGTACTCTTCCGATACGGCAAATGGTTCGTCTGGCGCAGCC
GTCTTCACGGATGCCTGGCAGGTCGTTTGCCTGCATCACGCAGGCGTTCCAGACCGAAGGATGATCGATGGCAAGGAACA
CTGGGTGCTGACCGACAAGACAACGGCGCCCGCTCGCATCGCCATCAATCTGCCCGTCGACAAAGTTCACTGGCTCGCGA
ATGAAGGCGTTCGCATTTCCAAGCTCATCGCCGACGTTCAAGAGAGAATTGCGGCGCCAGGCTTTGCCCGTTCCACCCTG
GTCGATGACCTTGTTGCCGATGCGACCGGGGTGAAAGCCTTTGCCGGCACGACGCCAGGCGAGAGCATCGTCGGCCCGCC
GCTCGTCGCCGCACCGGCCCTCAGGCTTGTTGCCGCCGAGGCACGACGCCGGCCGACGCGGCATACGCACCCGGCCAATT
ATTTCGACGGACGCGAAGGATATCGATCGGATTTCCTGCCCGTCGAAATCCCGCTGCCCACACTCGGGGTCAATGCATTG
CGGCATGGTTCGCCGGCCAAGGTCACCGGTGCAGCCGACGACGTCCTGCGCTACCAGCATTTCTCCGTGGTCCTGAATGC
CAATCCCAAGCGCAAGATGGCCTTCTACACCGCCGTGAACATCGACGGTGCCCGCTGGACGAACCTGGAACGGGGAAATG
ACGTGTGGTTTTACGACCCGCGCATCCCCGAGGAACTGCAAAACGGCGACGAACTCTATGGCGACGAGCCTGTGCCATCG
AAGAACTATTTCGATCGCGGTCACCTCGTGCGCCGCCTCGATCCGGTTTGGGGCGAGATCCGCGTTGCCAAGCAGGCCAA
TGACGACACGTTCCAGTGGACCAATTGCTCGCCGCAATATTGGGGCTTCAATCAGGGCGCCGATCTCTGGCAGGGTCTGG
AAAATTTCCTGCTCTACAACACCGACGACGAGAATGTTCAGGCTTCGGTCTTCTCCGGGCCGCTGTTTCGCGCGGACGAT
GAAGAGCACAGGGGAATTCTGATCCCGCAGTTTTTCTGGAAGGTCATTGCGGTAACCGACAAGAACGACAGGCTCTATAC
CAGCGGCTACATGGTCAGTCAGCAGGACTATGCCCTCGACATTCCGTTCGAACGACTCCCGGTCGGGCCGAACAGCACAA
AACCTGGTCAAAATTTCCAGGTCCCGGTGGCAAAGATTATCGAAGACACCGGTATTGTCTTTGCAGACGAGATCTTGAGC
GCCGACGCCTATTCCGGACCGTCAACCGGGCGAGCATTGCGCACCGTGGCGGACATACAGCATCCCCGGCGCTGA

Upstream 100 bases:

>100_bases
CGAGCAATCCTTTCCGCTATTGTTGGAACACCAGTCGGTTCGTCACGTCGCTGTTGTTTCCGTGCTGTAGTTTTTCGCCA
CAGTTGAAGAGGGGCTACCA

Downstream 100 bases:

>100_bases
TCATGCAAAGCGGCTCTTTGCCGCGGGCTGCATCCAAGGTTTGCGGGCGCATCGTGAAGCCAAACGTCGCCAGTTGCACC
GCCGGCCCGTTGATCGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MEISKFADEQLADQIAAGREAVPEVDPIRLIEQVVHRARAGAGVDFDVFESLIGEIDLVEINYLERGLMASRAVCRINVP
APVGDSSDWGTGFLIGPRLLLTNNHVIDSAEDALKATVEFGYELDAEGRLKRTTRFRLSPQDGFVTSPRDALDYTVVAIE
ENSEDGATPISDFGFLRLDARTGKTEVGQYATIIQHPDAKTKRISLRENKFVKYGDEADPERDNFLWYSSDTANGSSGAA
VFTDAWQVVCLHHAGVPDRRMIDGKEHWVLTDKTTAPARIAINLPVDKVHWLANEGVRISKLIADVQERIAAPGFARSTL
VDDLVADATGVKAFAGTTPGESIVGPPLVAAPALRLVAAEARRRPTRHTHPANYFDGREGYRSDFLPVEIPLPTLGVNAL
RHGSPAKVTGAADDVLRYQHFSVVLNANPKRKMAFYTAVNIDGARWTNLERGNDVWFYDPRIPEELQNGDELYGDEPVPS
KNYFDRGHLVRRLDPVWGEIRVAKQANDDTFQWTNCSPQYWGFNQGADLWQGLENFLLYNTDDENVQASVFSGPLFRADD
EEHRGILIPQFFWKVIAVTDKNDRLYTSGYMVSQQDYALDIPFERLPVGPNSTKPGQNFQVPVAKIIEDTGIVFADEILS
ADAYSGPSTGRALRTVADIQHPRR

Sequences:

>Translated_664_residues
MEISKFADEQLADQIAAGREAVPEVDPIRLIEQVVHRARAGAGVDFDVFESLIGEIDLVEINYLERGLMASRAVCRINVP
APVGDSSDWGTGFLIGPRLLLTNNHVIDSAEDALKATVEFGYELDAEGRLKRTTRFRLSPQDGFVTSPRDALDYTVVAIE
ENSEDGATPISDFGFLRLDARTGKTEVGQYATIIQHPDAKTKRISLRENKFVKYGDEADPERDNFLWYSSDTANGSSGAA
VFTDAWQVVCLHHAGVPDRRMIDGKEHWVLTDKTTAPARIAINLPVDKVHWLANEGVRISKLIADVQERIAAPGFARSTL
VDDLVADATGVKAFAGTTPGESIVGPPLVAAPALRLVAAEARRRPTRHTHPANYFDGREGYRSDFLPVEIPLPTLGVNAL
RHGSPAKVTGAADDVLRYQHFSVVLNANPKRKMAFYTAVNIDGARWTNLERGNDVWFYDPRIPEELQNGDELYGDEPVPS
KNYFDRGHLVRRLDPVWGEIRVAKQANDDTFQWTNCSPQYWGFNQGADLWQGLENFLLYNTDDENVQASVFSGPLFRADD
EEHRGILIPQFFWKVIAVTDKNDRLYTSGYMVSQQDYALDIPFERLPVGPNSTKPGQNFQVPVAKIIEDTGIVFADEILS
ADAYSGPSTGRALRTVADIQHPRR
>Mature_664_residues
MEISKFADEQLADQIAAGREAVPEVDPIRLIEQVVHRARAGAGVDFDVFESLIGEIDLVEINYLERGLMASRAVCRINVP
APVGDSSDWGTGFLIGPRLLLTNNHVIDSAEDALKATVEFGYELDAEGRLKRTTRFRLSPQDGFVTSPRDALDYTVVAIE
ENSEDGATPISDFGFLRLDARTGKTEVGQYATIIQHPDAKTKRISLRENKFVKYGDEADPERDNFLWYSSDTANGSSGAA
VFTDAWQVVCLHHAGVPDRRMIDGKEHWVLTDKTTAPARIAINLPVDKVHWLANEGVRISKLIADVQERIAAPGFARSTL
VDDLVADATGVKAFAGTTPGESIVGPPLVAAPALRLVAAEARRRPTRHTHPANYFDGREGYRSDFLPVEIPLPTLGVNAL
RHGSPAKVTGAADDVLRYQHFSVVLNANPKRKMAFYTAVNIDGARWTNLERGNDVWFYDPRIPEELQNGDELYGDEPVPS
KNYFDRGHLVRRLDPVWGEIRVAKQANDDTFQWTNCSPQYWGFNQGADLWQGLENFLLYNTDDENVQASVFSGPLFRADD
EEHRGILIPQFFWKVIAVTDKNDRLYTSGYMVSQQDYALDIPFERLPVGPNSTKPGQNFQVPVAKIIEDTGIVFADEILS
ADAYSGPSTGRALRTVADIQHPRR

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FB_RHISN (P55440)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443847.1
- ProteinModelPortal:   P55440
- GeneID:   962298
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03790
- HOGENOM:   HBG538362
- InterPro:   IPR001604
- InterPro:   IPR020821
- InterPro:   IPR009003
- Gene3D:   G3DSA:3.40.570.10
- SMART:   SM00892
- SMART:   SM00477

Pfam domain/function: PF01223 Endonuclease_NS; SSF50494 Pept_Ser_Cys

EC number: NA

Molecular weight: Translated: 73732; Mature: 73732

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISKFADEQLADQIAAGREAVPEVDPIRLIEQVVHRARAGAGVDFDVFESLIGEIDLVE
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEE
INYLERGLMASRAVCRINVPAPVGDSSDWGTGFLIGPRLLLTNNHVIDSAEDALKATVEF
EHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHC
GYELDAEGRLKRTTRFRLSPQDGFVTSPRDALDYTVVAIEENSEDGATPISDFGFLRLDA
CEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC
RTGKTEVGQYATIIQHPDAKTKRISLRENKFVKYGDEADPERDNFLWYSSDTANGSSGAA
CCCCCHHCCEEEEEECCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCE
VFTDAWQVVCLHHAGVPDRRMIDGKEHWVLTDKTTAPARIAINLPVDKVHWLANEGVRIS
EEECCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEEEECCHHHHHHHHCCCCHHH
KLIADVQERIAAPGFARSTLVDDLVADATGVKAFAGTTPGESIVGPPLVAAPALRLVAAE
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ARRRPTRHTHPANYFDGREGYRSDFLPVEIPLPTLGVNALRHGSPAKVTGAADDVLRYQH
HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCHHHHHHEEE
FSVVLNANPKRKMAFYTAVNIDGARWTNLERGNDVWFYDPRIPEELQNGDELYGDEPVPS
EEEEECCCCCCEEEEEEEEECCCCEECCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCC
KNYFDRGHLVRRLDPVWGEIRVAKQANDDTFQWTNCSPQYWGFNQGADLWQGLENFLLYN
CCCCCCCHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCEEEC
TDDENVQASVFSGPLFRADDEEHRGILIPQFFWKVIAVTDKNDRLYTSGYMVSQQDYALD
CCCCCEEEEEECCCCCCCCCCCCCCEECHHHHEEEEEEECCCCEEEECCEEEECCCCEEE
IPFERLPVGPNSTKPGQNFQVPVAKIIEDTGIVFADEILSADAYSGPSTGRALRTVADIQ
CCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHC
HPRR
CCCC
>Mature Secondary Structure
MEISKFADEQLADQIAAGREAVPEVDPIRLIEQVVHRARAGAGVDFDVFESLIGEIDLVE
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEE
INYLERGLMASRAVCRINVPAPVGDSSDWGTGFLIGPRLLLTNNHVIDSAEDALKATVEF
EHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHC
GYELDAEGRLKRTTRFRLSPQDGFVTSPRDALDYTVVAIEENSEDGATPISDFGFLRLDA
CEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC
RTGKTEVGQYATIIQHPDAKTKRISLRENKFVKYGDEADPERDNFLWYSSDTANGSSGAA
CCCCCHHCCEEEEEECCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCE
VFTDAWQVVCLHHAGVPDRRMIDGKEHWVLTDKTTAPARIAINLPVDKVHWLANEGVRIS
EEECCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEEEECCHHHHHHHHCCCCHHH
KLIADVQERIAAPGFARSTLVDDLVADATGVKAFAGTTPGESIVGPPLVAAPALRLVAAE
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ARRRPTRHTHPANYFDGREGYRSDFLPVEIPLPTLGVNALRHGSPAKVTGAADDVLRYQH
HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCHHHHHHEEE
FSVVLNANPKRKMAFYTAVNIDGARWTNLERGNDVWFYDPRIPEELQNGDELYGDEPVPS
EEEEECCCCCCEEEEEEEEECCCCEECCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCC
KNYFDRGHLVRRLDPVWGEIRVAKQANDDTFQWTNCSPQYWGFNQGADLWQGLENFLLYN
CCCCCCCHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCEEEC
TDDENVQASVFSGPLFRADDEEHRGILIPQFFWKVIAVTDKNDRLYTSGYMVSQQDYALD
CCCCCEEEEEECCCCCCCCCCCCCCEECHHHHEEEEEEECCCCEEEECCEEEECCCCEEE
IPFERLPVGPNSTKPGQNFQVPVAKIIEDTGIVFADEILSADAYSGPSTGRALRTVADIQ
CCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHC
HPRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424