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The map label for this gene is nodZ

Identifier: 16519647

GI number: 16519647

Start: 48538

End: 49506

Strand: Direct

Name: nodZ

Synonym: NGR_a00400

Alternate gene names: 16519647

Gene position: 48538-49506 (Clockwise)

Preceding gene: 16519648

Following gene: 16519646

Centisome position: 9.05

GC content: 53.87

Gene sequence:

>969_bases
TTGTACAATCGATATGTCCTCTCTCGGAGACGTACTGGTTTCGGTGACTGTCTGTGGTCGCTGGCGGCCGCTTGGCGCTA
CGCCCAAAGGACGGCGCGAACGTTAGCCGTTGACTGGCGCGGGTCCTGCTACCTTGATCAGCCCTTCACAAACGCCTTTC
CGGTGTTTTTTGAACCAATCAAGGATATCGCAGGTGTCCCTTTTATTTGCGATAACCGGGTCAACGAGTTTTCCTTCCCA
GGACCATTCTTCCCAAATTGGTGGAATAAACCTGCGATTGAATGTGTTTACCGCCCAGATGCTCAGGTTTTTCGAGAGCG
AGACGAACTCGATGAACTTTTCCAGGCCCAAGATGATGTCGAGGCCAACACGGTAGTGTGTGATGCGTGTTTGATGTGGC
GCTGCGACGAGGAGGCAGAGCGGCAGATTTTCTGCAGTGTCAAGCCTCGGGCTGAAATTCAGGCTCGCATAGACGCTATC
TATCAGGAGCACTTCTATGGGTACAGTGCGATCGGGGTTCATGTTCGGCATGGTAACGGCGAAGACGTTATGGACCATGC
ACCCTACTGGGCCGATCCGGACCTTGCCGTGCATCAAGTGTGCACTGCCATTAATGCTGCCAAAGCGTTGCCCCACCCGA
AGCCTGTGCGGGTGATTTTGTGCACCGATAGCGCGCGGGTATTGGACCAGGTGTCGAGTAGGTTCCCCGATCTTCTCACG
ATCCCGAAAAGTTTCCGAGCGGATCAGTCTGGCCCATTACACAGCGCAGATCTCGGGGTTGAGGGCGGAATTTCCGCCCT
CGTCGAGATGTATCTTCTTGGGCTTTGCGACACCGTCATTCGGTTTCCTCCGACAAGCGCCTTTACACGTTACGCACGCC
TTTCTGTCCCAAGGGTTATTGAGTTTGATCTGAACGATCCTAGTCGCCTGGTCGTGATCGAAAGATCTTCAACAAATACC
GCCTCTTGA

Upstream 100 bases:

>100_bases
AATTTTACTGATGTTGCCGAACTCCATTAGGAAGCTCTGAATTGATTGGAAATCCGTAGAAGACAGTAAGTCAGAGCGGC
GGCACTAAGGACGGGCAGCA

Downstream 100 bases:

>100_bases
ATGAAAATCGTCACCTCAATTCTAGGCGTGGTGAAGAGCAGTCATGGAGAAACTTGGGCGCGCTCCAAGGGACACGAGCG
CCTCATGCCCAGTTGCCCCG

Product: chitin oligosaccharide fucosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPIKDIAGVPFICDNRVNEFSFP
GPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDVEANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAI
YQEHFYGYSAIGVHVRHGNGEDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLT
IPKSFRADQSGPLHSADLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVIEFDLNDPSRLVVIERSSTNT
AS

Sequences:

>Translated_322_residues
MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPIKDIAGVPFICDNRVNEFSFP
GPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDVEANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAI
YQEHFYGYSAIGVHVRHGNGEDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLT
IPKSFRADQSGPLHSADLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVIEFDLNDPSRLVVIERSSTNT
AS
>Mature_322_residues
MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPIKDIAGVPFICDNRVNEFSFP
GPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDVEANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAI
YQEHFYGYSAIGVHVRHGNGEDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLT
IPKSFRADQSGPLHSADLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVIEFDLNDPSRLVVIERSSTNT
AS

Specific function: Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP-fucose as the donor group

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NODZ_RHISN (P55355)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443767.1
- ProteinModelPortal:   P55355
- SMR:   P55355
- GeneID:   962295
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00400
- HOGENOM:   HBG334845
- ProtClustDB:   CLSK864398
- GO:   GO:0009877
- InterPro:   IPR008716
- PIRSF:   PIRSF020513

Pfam domain/function: PF05830 NodZ

EC number: NA

Molecular weight: Translated: 36524; Mature: 36524

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPI
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCHHHHHHH
KDIAGVPFICDNRVNEFSFPGPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDV
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
EANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAIYQEHFYGYSAIGVHVRHGNG
CCCCEEEHHHHHHCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCC
EDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLT
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
IPKSFRADQSGPLHSADLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVI
CCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE
EFDLNDPSRLVVIERSSTNTAS
EECCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MYNRYVLSRRRTGFGDCLWSLAAAWRYAQRTARTLAVDWRGSCYLDQPFTNAFPVFFEPI
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCHHHHHHH
KDIAGVPFICDNRVNEFSFPGPFFPNWWNKPAIECVYRPDAQVFRERDELDELFQAQDDV
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
EANTVVCDACLMWRCDEEAERQIFCSVKPRAEIQARIDAIYQEHFYGYSAIGVHVRHGNG
CCCCEEEHHHHHHCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCC
EDVMDHAPYWADPDLAVHQVCTAINAAKALPHPKPVRVILCTDSARVLDQVSSRFPDLLT
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
IPKSFRADQSGPLHSADLGVEGGISALVEMYLLGLCDTVIRFPPTSAFTRYARLSVPRVI
CCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE
EFDLNDPSRLVVIERSSTNTAS
EECCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424