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The map label for this gene is ttdB [C]

Identifier: 15668798

GI number: 15668798

Start: 546998

End: 547585

Strand: Direct

Name: ttdB [C]

Synonym: MJ0617

Alternate gene names: 15668798

Gene position: 546998-547585 (Clockwise)

Preceding gene: 15668793

Following gene: 15668801

Centisome position: 32.85

GC content: 31.97

Gene sequence:

>588_bases
TTGGAATATACATTTAACAAATTAACAAAAAAAGATGTTAAAAAGCTTAAAGTTGGAGATATTGTCTATTTAAATGGCAA
AATATACACTGCGAGGGATGAAGCACATTTAAAAATTATTGAGATGCTAAAAAGCAATGAAAAACTACCTTTTGATTTGA
ATGAATCTATTATCTACCATGCTGGCCCAATAATGAAAAAAGTAAATGATAGCTGGGTTTGTGTTTCTATAGGCCCAACA
ACATCTGCAAGGATGAATGATGTTGAAGAGGAGTTCATAAAATTAACTAACATCTCTGCAATTGTTGGAAAGGGAGGAAT
GAAAAAAGAGTTATTAAAAACTTTTGAAGATTATGGTGTGGTTTATTTAGCAGCTCCAGGAGGTTGTGCAGCTTTGTTAG
CTAATTCAGTAAAAAGAGTTGATAACGTATATTTTTTAGATGAATTAGGGATGCCAGAGGCTGTTTGGGAGTTGGAAGTT
AATAATTTTGGCCCTTTAATTGTGGCAATGGATAGTCATGGAAACAGCATCTATGAGGAGGTAAATAAAAAAGTTTATGA
AAAGCTTAATGAATTGATAGGATTATAA

Upstream 100 bases:

>100_bases
CAAAAAGGTCTAAATTTTTATGTAAGAGATTTTAAAACTAATTATAAATAAATTATGGTTTTGATTATAGAGTAAGCTAT
AAAATATCAGGAGGGATATT

Downstream 100 bases:

>100_bases
ATATCTTTTTAATATTTCAATAACTTCATCTTTTTTAATATCTCCTATCAATACAGTTTTTTGTGGATTTAGCTTTCCAG
ATACTATTTCAACATCTTTT

Product: tartrate dehydratse subunit beta TtdB

Products: NA

Alternate protein names: Fumarase

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEYTFNKLTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVNDSWVCVSIGPT
TSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGCAALLANSVKRVDNVYFLDELGMPEAVWELEV
NNFGPLIVAMDSHGNSIYEEVNKKVYEKLNELIGL

Sequences:

>Translated_195_residues
MEYTFNKLTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVNDSWVCVSIGPT
TSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGCAALLANSVKRVDNVYFLDELGMPEAVWELEV
NNFGPLIVAMDSHGNSIYEEVNKKVYEKLNELIGL
>Mature_195_residues
MEYTFNKLTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVNDSWVCVSIGPT
TSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGCAALLANSVKRVDNVYFLDELGMPEAVWELEV
NNFGPLIVAMDSHGNSIYEEVNKKVYEKLNELIGL

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family

Homologues:

Organism=Escherichia coli, GI1789443, Length=183, Percent_Identity=42.0765027322404, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1787897, Length=160, Percent_Identity=33.75, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790564, Length=164, Percent_Identity=33.5365853658537, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FUMB_METJA (Q58034)

Other databases:

- EMBL:   L77117
- PIR:   A64377
- RefSeq:   NP_247601.1
- ProteinModelPortal:   Q58034
- SMR:   Q58034
- GeneID:   1451483
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0617
- NMPDR:   fig|243232.1.peg.638
- TIGR:   MJ0617
- HOGENOM:   HBG655206
- OMA:   VIYHAGP
- ProtClustDB:   CLSK876266
- BioCyc:   MJAN243232:MJ_0617-MONOMER
- BRENDA:   4.2.1.2
- InterPro:   IPR004647
- Gene3D:   G3DSA:3.20.130.10
- TIGRFAMs:   TIGR00723

Pfam domain/function: PF05683 Fumerase_C

EC number: =4.2.1.2

Molecular weight: Translated: 21869; Mature: 21869

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: ACT_SITE 36-36 BINDING 104-104

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTFNKLTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYH
CCCCHHHHHHHHHHHEECCCEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEE
AGPIMKKVNDSWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGV
CCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHCCE
VYLAAPGGCAALLANSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIYEE
EEEECCCCHHHHHHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHH
VNKKVYEKLNELIGL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYTFNKLTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYH
CCCCHHHHHHHHHHHEECCCEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEE
AGPIMKKVNDSWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGV
CCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHCCE
VYLAAPGGCAALLANSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIYEE
EEEECCCCHHHHHHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHH
VNKKVYEKLNELIGL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087