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The map label for this gene is rpl12p

Identifier: 15668685

GI number: 15668685

Start: 448420

End: 448728

Strand: Reverse

Name: rpl12p

Synonym: MJ0508

Alternate gene names: 15668685

Gene position: 448728-448420 (Counterclockwise)

Preceding gene: 15668686

Following gene: 15668684

Centisome position: 26.95

GC content: 42.07

Gene sequence:

>309_bases
ATGGAATACATATATGCAGCTTTATTATTGCACAGTGCAGGAAAAGAAATCACAGAAGATGCAATTAAGGCAGTTTTATC
AGCTGCTGGTGTAGAAGTTGATGATGCAAGAGTTAAAGCATTAGTTGCTGGATTGGAAGGAGTAGATATTGAAGAAGCTA
TTGCAAACGCTGCAATGCCTGTTGCAGCTGCTCCAGCTGCTGCAGCTCCAGCAGCTGCTGCTGAAGAGAAGAAAGAAGAA
GAGAAAAAAGAAGAGAAGAAGGAAGAAGATACAGCTGCAGTTGCTGGATTGGCAGCTTTATTCGGATAA

Upstream 100 bases:

>100_bases
AATAGTGAATTGCAAACTCTACTTCAAATTAATATTGTTTAGATATTACGGTTAAAACAAATAAATAAAACACAAAGGAG
AACATTTGGAGGTGTAAATT

Downstream 100 bases:

>100_bases
ATTTTCTACTTTCTTTTTTTATTTTTAAATATTACATTTATTAAGTTAAATATACAAATTTTATGTAATATTTAAAAGTA
TTTATATATAAAGTATTTAT

Product: 50S ribosomal protein L12P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEYIYAALLLHSAGKEITEDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIANAAMPVAAAPAAAAPAAAAEEKKEE
EKKEEKKEEDTAAVAGLAALFG

Sequences:

>Translated_102_residues
MEYIYAALLLHSAGKEITEDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIANAAMPVAAAPAAAAPAAAAEEKKEE
EKKEEKKEEDTAAVAGLAALFG
>Mature_102_residues
MEYIYAALLLHSAGKEITEDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIANAAMPVAAAPAAAAPAAAAEEKKEE
EKKEEKKEEDTAAVAGLAALFG

Specific function: Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation

COG id: COG2058

COG function: function code J; Ribosomal protein L12E/L44/L45/RPP1/RPP2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L12P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL12_METJA (P54048)

Other databases:

- EMBL:   L77117
- PIR:   D64363
- RefSeq:   NP_247484.1
- ProteinModelPortal:   P54048
- GeneID:   1451370
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0508
- NMPDR:   fig|243232.1.peg.521
- TIGR:   MJ0508
- OMA:   GIEANDA
- ProtClustDB:   PRK06402
- BioCyc:   MJAN243232:MJ_0508-MONOMER
- GO:   GO:0005840
- InterPro:   IPR001813
- InterPro:   IPR022295
- TIGRFAMs:   TIGR03685

Pfam domain/function: PF00428 Ribosomal_60s

EC number: NA

Molecular weight: Translated: 10363; Mature: 10363

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIYAALLLHSAGKEITEDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIANAAMP
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCC
VAAAPAAAAPAAAAEEKKEEEKKEEKKEEDTAAVAGLAALFG
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEYIYAALLLHSAGKEITEDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIANAAMP
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCC
VAAAPAAAAPAAAAEEKKEEEKKEEKKEEDTAAVAGLAALFG
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087