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The map label for this gene is rplP0

Identifier: 15668686

GI number: 15668686

Start: 448855

End: 449871

Strand: Reverse

Name: rplP0

Synonym: MJ0509

Alternate gene names: 15668686

Gene position: 449871-448855 (Counterclockwise)

Preceding gene: 15668687

Following gene: 15668685

Centisome position: 27.02

GC content: 37.66

Gene sequence:

>1017_bases
ATGGAAACAAAAGTGAAAGCACACGTAGCCCCATGGAAAATTGAAGAAGTTAAAACACTCAAGGGGCTTATTAAAAGTAA
GCCTGTAGTGGCTATTGTAGATATGATGGACGTTCCTGCCCCTCAATTGCAAGAGATTAGAGATAAAATCAGGGACAAAG
TTAAATTAAGAATGTCAAGAAACACCTTAATTATAAGAGCTTTAAAAGAAGCTGCTGAAGAATTAAACAATCCAAAATTA
GCTGAGTTAGCAAACTACGTTGAGAGAGGGGCGGCTATATTAGTTACAGACATGAACCCATTCAAGTTATACAAATTATT
AGAAGAGAACAAAAGTCCTGCTCCTGTAAGAGGAGGACAAATAGCTCCTTGTGACATTAAAGTTGAGAAAGGTTCAACTG
GAATGCCTCCAGGACCTTTCTTAGGAGAGCTTAAAAGTGTTGGTATTCCAGCTGCGATAGAAAAAGGTAAAATTGCAATT
AAAGAAGATAAAGTTGTTGTTAAAAAAGGAGAAGTTGTTTCACCAAAATTGGCAGCTGTCTTAGACAGATTAGGAATCAA
GCCAATAAAAGTTGGTTTAAATATCTTAGCTGTTTATGAAGATGGAATTATCTACACACCAGATGTCTTAAAGGTTGATG
AAGAGAAGTTATTAGCTGACATACAAGCTGCATACCAAAACGCATTTAACTTGGCATTTAACACAGCATATCCAGCAAAA
GAAGTATTGCCATTCTTAATACAGAAGGCATTCATAAACGCAAGAGCTTTATCAGTAGAGACAGCATTCGTAACAAAAGA
AACAGCTGGAGACATATTAGCGAAAGCTCAGGCTCAGGCATTAGCTTTAGCTTCAAAATTGCCTGACGAAGCATTGGATG
AAGACATTAAAGCTAAGTTGTCCTCAGTAGAAGTTTCAGCTGCTCCAGCAGCTGAGGAAGAGAAAGAAGAAGAGAAAAAA
GAGGAAGAGAAGAAAGAAGAAGATACAGGAGCGGCTGGATTAGCCCTATTGTTCTAA

Upstream 100 bases:

>100_bases
ATAAAAGATGCTTATGTCAAGCTAACCATGGGTCCTGCTGTAAAGGTTAAGAAAGAGAAGGCTAAGAAAAAATAAATAAT
AATAAGTGAAGGGGATAGAA

Downstream 100 bases:

>100_bases
CCGAAAAATATAAATAACTAATTATAAATAGTGAATTGCAAACTCTACTTCAAATTAATATTGTTTAGATATTACGGTTA
AAACAAATAAATAAAACACA

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
METKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKL
AELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAI
KEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAK
EVLPFLIQKAFINARALSVETAFVTKETAGDILAKAQAQALALASKLPDEALDEDIKAKLSSVEVSAAPAAEEEKEEEKK
EEEKKEEDTGAAGLALLF

Sequences:

>Translated_338_residues
METKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKL
AELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAI
KEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAK
EVLPFLIQKAFINARALSVETAFVTKETAGDILAKAQAQALALASKLPDEALDEDIKAKLSSVEVSAAPAAEEEKEEEKK
EEEKKEEDTGAAGLALLF
>Mature_338_residues
METKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKL
AELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAI
KEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAK
EVLPFLIQKAFINARALSVETAFVTKETAGDILAKAQAQALALASKLPDEALDEDIKAKLSSVEVSAAPAAEEEKEEEKK
EEEKKEEDTGAAGLALLF

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family

Homologues:

Organism=Homo sapiens, GI4506667, Length=254, Percent_Identity=31.1023622047244, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI16933546, Length=254, Percent_Identity=31.1023622047244, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17506815, Length=237, Percent_Identity=31.2236286919831, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323371, Length=227, Percent_Identity=26.8722466960352, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17737731, Length=263, Percent_Identity=29.277566539924, Blast_Score=108, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLA0_METJA (P54049)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247485.1
- PDB:   3JSY
- PDBsum:   3JSY
- ProteinModelPortal:   P54049
- SMR:   P54049
- GeneID:   1451371
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0509
- NMPDR:   fig|243232.1.peg.522
- TIGR:   MJ0509
- HOGENOM:   HBG731512
- OMA:   GKNTMIR
- ProtClustDB:   PRK04019
- BioCyc:   MJAN243232:MJ_0509-MONOMER
- GO:   GO:0005840
- HAMAP:   MF_00280
- InterPro:   IPR001813
- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909
- Gene3D:   G3DSA:1.10.10.380

Pfam domain/function: PF00428 Ribosomal_60s; PF00466 Ribosomal_L10

EC number: NA

Molecular weight: Translated: 36751; Mature: 36751

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSR
CCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCC
NTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCE
IAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAV
ECCCEEEEECCCCCCCCCCHHHHHHHCCCCCEECCCCEEEECCCEEEECCCCCCHHHHHH
LDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAK
HHHHCCCEEEECCEEEEEEECCEEECCCCEECCHHHHHHHHHHHHHHHHHHEECCCCCHH
EVLPFLIQKAFINARALSVETAFVTKETAGDILAKAQAQALALASKLPDEALDEDIKAKL
HHHHHHHHHHHHHHHHEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SSVEVSAAPAAEEEKEEEKKEEEKKEEDTGAAGLALLF
HHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
METKVKAHVAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSR
CCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCC
NTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCE
IAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAV
ECCCEEEEECCCCCCCCCCHHHHHHHCCCCCEECCCCEEEECCCEEEECCCCCCHHHHHH
LDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAK
HHHHCCCEEEECCEEEEEEECCEEECCCCEECCHHHHHHHHHHHHHHHHHHEECCCCCHH
EVLPFLIQKAFINARALSVETAFVTKETAGDILAKAQAQALALASKLPDEALDEDIKAKL
HHHHHHHHHHHHHHHHEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SSVEVSAAPAAEEEKEEEKKEEEKKEEDTGAAGLALLF
HHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087