Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
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Accession | NC_000907 |
Length | 1,830,138 |
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The map label for this gene is 16273251
Identifier: 16273251
GI number: 16273251
Start: 1417617
End: 1418228
Strand: Reverse
Name: 16273251
Synonym: HI1341
Alternate gene names: NA
Gene position: 1418228-1417617 (Counterclockwise)
Preceding gene: 16273252
Following gene: 16273250
Centisome position: 77.49
GC content: 39.87
Gene sequence:
>612_bases ATGCTGTGCTGGATTGGCTACAAAAATGGGATTTTACCGCAGCAGAACAGCACGCTATATCCTTGGCTGAATCCGTCAAA GTGCGGCGTAATTTTTGATGGTTTTCAACTTGTGGGCGATGATTTCAATTCAGATCAAACGGCTGAAAATACATCGCCAG CTTGGCAAGTGCTTTACACAACCCATTTACAAAGTTGCTCGCCGATTCATAGTGGAGAAAATTTCGCACCCATCCCTTTG TATAAACAACTAAAAAATCAACCGCACCTAAGCCAAGATCTGATTAAATGGCAAGAAAATTGGCAAGCCTGCGATCAACT ACAAATGAATGGTGCGGTATTAGAACAACAATCTTTGGCAGAAATTTCCGATCATCAAAGTACGCTTTCAAAACACGGAC GATATTTAGCTCAAGAAATAGAAAAAGAAACTGGCATACCGACTTACTATTATTTATATCGTGTAGGTGGGCAATCTTTA GAATCTGAAAAATCCCGTTGCTGCCCTTCTTGTGGTGCAAATTGGGCGTTAAAAGACGCGATTTTTGATACCTTTCATTT TAAATGCGATACCTGTCGATTAGTTTCGAATCTATCGTGGAATTTTTTGTAA
Upstream 100 bases:
>100_bases AAAATGGTTGAACGTGTGTCAAATAATCGTATTACTTTTGCCGAATTGCCTTATCGTTTAGAAGCTGGCACACCCAATAT TGCTGGGGTTATAGGCTTTA
Downstream 100 bases:
>100_bases TTTAAGTCCATGCCTCAACTCTCTGTTGGAATGATAAAGTCTTAGCCCCCTTCCGACGCTTCGCGCCACCTTCCCCCGCA AGCAAGGGAAGGCAAAATTA
Product: hemoglobin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLCWIGYKNGILPQQNSTLYPWLNPSKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENFAPIPL YKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLAEISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSL ESEKSRCCPSCGANWALKDAIFDTFHFKCDTCRLVSNLSWNFL
Sequences:
>Translated_203_residues MLCWIGYKNGILPQQNSTLYPWLNPSKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENFAPIPL YKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLAEISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSL ESEKSRCCPSCGANWALKDAIFDTFHFKCDTCRLVSNLSWNFL >Mature_203_residues MLCWIGYKNGILPQQNSTLYPWLNPSKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENFAPIPL YKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLAEISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSL ESEKSRCCPSCGANWALKDAIFDTFHFKCDTCRLVSNLSWNFL
Specific function: Unknown
COG id: COG5595
COG function: function code R; Zn-ribbon-containing, possibly nucleic-acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1341_HAEIN (P44166)
Other databases:
- EMBL: L42023 - PIR: D64026 - RefSeq: NP_439492.1 - GeneID: 950616 - GenomeReviews: L42023_GR - KEGG: hin:HI1341 - NMPDR: fig|71421.1.peg.1277 - TIGR: HI_1341 - HOGENOM: HBG296843 - OMA: LYRVGGE - BioCyc: HINF71421:HI_1341-MONOMER - InterPro: IPR016908
Pfam domain/function: PF10071 DUF2310
EC number: NA
Molecular weight: Translated: 23166; Mature: 23166
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCWIGYKNGILPQQNSTLYPWLNPSKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYT CEEEEECCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHH THLQSCSPIHSGENFAPIPLYKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLA HHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKDA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHH IFDTFHFKCDTCRLVSNLSWNFL HHHHHHCCCHHHHHHHCCCCCCC >Mature Secondary Structure MLCWIGYKNGILPQQNSTLYPWLNPSKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYT CEEEEECCCCCCCCCCCEECCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHH THLQSCSPIHSGENFAPIPLYKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLA HHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EISDHQSTLSKHGRYLAQEIEKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKDA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHH IFDTFHFKCDTCRLVSNLSWNFL HHHHHHCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800