Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
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Accession | NC_000907 |
Length | 1,830,138 |
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The map label for this gene is 16273154
Identifier: 16273154
GI number: 16273154
Start: 1307437
End: 1307904
Strand: Reverse
Name: 16273154
Synonym: HI1235
Alternate gene names: NA
Gene position: 1307904-1307437 (Counterclockwise)
Preceding gene: 16273155
Following gene: 16273152
Centisome position: 71.46
GC content: 35.68
Gene sequence:
>468_bases ATGCCTCTATCTAAAACATTGGTGCAAAAATTACAACAAGCAGGCATGGCCATTGCGAATAATCAGCCTCAAATTAAGTT TACCCCTCTTTCTATTTCTGATGAAAAAGGCAAAGTGGCATTGGATCTAAATATTGCTTTAGTGCCAAATCCTAAATTTG ATTTAATGCACAGTGGCTTATACAAACAATTCAAAGATTTTTCGATCAATTTTGATGTGAACAAAGAAACTGCGATTTCA TTGTTATCTAAATTTGTACCAGAAAACCAAAAGCAAGATTTAGTTTACAGAATGGACGAATTAATTGCTGAAGGCGAAGC AAATGGCATTATCGTAAACACGGACAAAACCGTAACATTAACGCTTGCTCTAGAAAATAACGACTTGAAACTAAACGGCA AGCCAATCCCAGAAGAACAGTTGAAAGTGGTACTCTTTATACTTGTAATGGGGGGATTTGGGAGATAA
Upstream 100 bases:
>100_bases TAGGTAAAGTGACCAACAATGTAGAATTCAACCATATTGATGGCAACGCATTACAAGAACTTTTAAATATTTTAGTTGCT ATAGGCAAAGCCGACTCAGA
Downstream 100 bases:
>100_bases CTGAAACAGTGCGATAAATTGTCGCCCTGTTTTGTATTTAATTAAAAGTATCGTAGGGTGGGCTTCAGCCCACCGTTTTT ATTCCATTTTTTATGGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPLSKTLVQKLQQAGMAIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMHSGLYKQFKDFSINFDVNKETAIS LLSKFVPENQKQDLVYRMDELIAEGEANGIIVNTDKTVTLTLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR
Sequences:
>Translated_155_residues MPLSKTLVQKLQQAGMAIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMHSGLYKQFKDFSINFDVNKETAIS LLSKFVPENQKQDLVYRMDELIAEGEANGIIVNTDKTVTLTLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR >Mature_154_residues PLSKTLVQKLQQAGMAIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMHSGLYKQFKDFSINFDVNKETAISL LSKFVPENQKQDLVYRMDELIAEGEANGIIVNTDKTVTLTLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1235_HAEIN (P44131)
Other databases:
- EMBL: L42023 - PIR: E64022 - RefSeq: NP_439391.1 - GeneID: 950185 - GenomeReviews: L42023_GR - KEGG: hin:HI1235 - NMPDR: fig|71421.1.peg.1181 - TIGR: HI_1235 - BioCyc: HINF71421:HI_1235-MONOMER - InterPro: IPR010352
Pfam domain/function: PF06097 DUF945
EC number: NA
Molecular weight: Translated: 17229; Mature: 17098
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSKTLVQKLQQAGMAIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMHSGL CCCHHHHHHHHHHCCCEEECCCCCEEEEECEECCCCCCEEEEEEEEEECCCCHHHHHHHH YKQFKDFSINFDVNKETAISLLSKFVPENQKQDLVYRMDELIAEGEANGIIVNTDKTVTL HHHHHCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEE TLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR EEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLSKTLVQKLQQAGMAIANNQPQIKFTPLSISDEKGKVALDLNIALVPNPKFDLMHSGL CCHHHHHHHHHHCCCEEECCCCCEEEEECEECCCCCCEEEEEEEEEECCCCHHHHHHHH YKQFKDFSINFDVNKETAISLLSKFVPENQKQDLVYRMDELIAEGEANGIIVNTDKTVTL HHHHHCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEE TLALENNDLKLNGKPIPEEQLKVVLFILVMGGFGR EEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800