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The map label for this gene is ydgA [C]

Identifier: 16273155

GI number: 16273155

Start: 1307775

End: 1308878

Strand: Reverse

Name: ydgA [C]

Synonym: HI1236

Alternate gene names: 16273155

Gene position: 1308878-1307775 (Counterclockwise)

Preceding gene: 16273158

Following gene: 16273154

Centisome position: 71.52

GC content: 34.33

Gene sequence:

>1104_bases
ATGAAAAAATCAAAAATTGCTGCAGGCGTAGTGGTTGCTCTTGCTGCCGTTTGGTGCACAAGTGCATGGTTTACAGGGAA
AAAAGCTGAAGAAGAATATTTATATCAACTAGAACAGTTAAATCAACTATTTACCAAAACTGAGGCATTAGAAGAAAGTA
AAATTTTTTATAAAAATATAAAATTTGAAAGAGGATTATTTGCCTCTCACATTCAAGATCAAATAGAAATTCACAAGGCA
AATGAAACGATCATTATTCCTTTATCATCAACACTTTATCACGGGCCTTTGCCGCTTGATCGTGTGGCAAAACTGAATTT
CGTTCCAGCCATTTTTTCAAGCCAAACATTGTTAGGAAAAAATGCAACAACTCAGGCATTCTTTGATATCACAGAATCAG
AGAAACCGTTACAACTGAATTTCGCAATGAATTATTCATTAAGCGGTAATGCGGAATTAAAACTTGCATCGGGGCAATAT
CACAATGAGCAATCTAAGACAGATTTTGATTGGTCAAATGTCGTATTAAATATTGATTTAAACCAAAATACACCAAATAA
CTATGTGCTATCTGTCGATACATTTAATTCAAATGCCCCTAATCATGCAGTTTCAACCGCTTCATCAATTAAAATAAAAG
ATCTTGTCGTACAAGGCTCGTTGCAAAGCACAAAATGGCCATTTATTTATAGTGGGAATATCAATAGTAAAATAGGCTAT
TTTGAGCAAAATACCGAATCTGCAGAGAGTGGCGAAAAATTCTCTCTTATTCAGAAAAACAGCCAAGCAAATTTAACTAC
ACAAGTTGAGGGTGATACAGTAAATATCATCAATAAAACAAATCTGGATGAATTACATATTAACGGTAACAACTTAGGTA
AAGTGACCAACAATGTAGAATTCAACCATATTGATGGCAACGCATTACAAGAACTTTTAAATATTTTAGTTGCTATAGGC
AAAGCCGACTCAGAATGCCTCTATCTAAAACATTGGTGCAAAAATTACAACAAGCAGGCATGGCCATTGCGAATAATCAG
CCTCAAATTAAGTTTACCCCTCTTTCTATTTCTGATGAAAAAGGCAAAGTGGCATTGGATCTAA

Upstream 100 bases:

>100_bases
AAATGATGAACTTCAAGGGGAAAACAAAATTTTCAGGCAAGAAAAAGGGATTTGTGATAAATTTGGCGAAAATTTTTACT
TTAAAATAGGAAAGAAATAA

Downstream 100 bases:

>100_bases
ATATTGCTTTAGTGCCAAATCCTAAATTTGATTTAATGCACAGTGGCTTATACAAACAATTCAAAGATTTTTCGATCAAT
TTTGATGTGAACAAAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKKSKIAAGVVVALAAVWCTSAWFTGKKAEEEYLYQLEQLNQLFTKTEALEESKIFYKNIKFERGLFASHIQDQIEIHKA
NETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGKNATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQY
HNEQSKTDFDWSNVVLNIDLNQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGY
FEQNTESAESGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVEFNHIDGNALQELLNILVAIG
KADSECLYLKHWCKNYNKQAWPLRIISLKLSLPLFLFLMKKAKWHWI

Sequences:

>Translated_367_residues
MKKSKIAAGVVVALAAVWCTSAWFTGKKAEEEYLYQLEQLNQLFTKTEALEESKIFYKNIKFERGLFASHIQDQIEIHKA
NETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGKNATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQY
HNEQSKTDFDWSNVVLNIDLNQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGY
FEQNTESAESGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVEFNHIDGNALQELLNILVAIG
KADSECLYLKHWCKNYNKQAWPLRIISLKLSLPLFLFLMKKAKWHWI
>Mature_367_residues
MKKSKIAAGVVVALAAVWCTSAWFTGKKAEEEYLYQLEQLNQLFTKTEALEESKIFYKNIKFERGLFASHIQDQIEIHKA
NETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGKNATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQY
HNEQSKTDFDWSNVVLNIDLNQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGY
FEQNTESAESGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVEFNHIDGNALQELLNILVAIG
KADSECLYLKHWCKNYNKQAWPLRIISLKLSLPLFLFLMKKAKWHWI

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgA and yihF

Homologues:

Organism=Escherichia coli, GI1787900, Length=187, Percent_Identity=31.0160427807487, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082339, Length=162, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1236_HAEIN (P44132)

Other databases:

- EMBL:   L42023
- PIR:   F64022
- RefSeq:   NP_439392.1
- GeneID:   950175
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1236
- NMPDR:   fig|71421.1.peg.1182
- TIGR:   HI_1236
- HOGENOM:   HBG495111
- ProtClustDB:   CLSK808497
- BioCyc:   HINF71421:HI_1236-MONOMER
- InterPro:   IPR010352

Pfam domain/function: PF06097 DUF945

EC number: NA

Molecular weight: Translated: 41355; Mature: 41355

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb1424d0)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSKIAAGVVVALAAVWCTSAWFTGKKAEEEYLYQLEQLNQLFTKTEALEESKIFYKNI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
KFERGLFASHIQDQIEIHKANETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGK
CCCCCHHHHHHHHHEEEEECCCEEEEEECHHEECCCCCHHHHHHCCEEHHHHCCCEEECC
NATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQYHNEQSKTDFDWSNVVLNIDL
CCCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
NQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGY
CCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCE
FEQNTESAESGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVE
EECCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCEECCEE
FNHIDGNALQELLNILVAIGKADSECLYLKHWCKNYNKQAWPLRIISLKLSLPLFLFLMK
EEECCHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHH
KAKWHWI
HCCCCCH
>Mature Secondary Structure
MKKSKIAAGVVVALAAVWCTSAWFTGKKAEEEYLYQLEQLNQLFTKTEALEESKIFYKNI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
KFERGLFASHIQDQIEIHKANETIIIPLSSTLYHGPLPLDRVAKLNFVPAIFSSQTLLGK
CCCCCHHHHHHHHHEEEEECCCEEEEEECHHEECCCCCHHHHHHCCEEHHHHCCCEEECC
NATTQAFFDITESEKPLQLNFAMNYSLSGNAELKLASGQYHNEQSKTDFDWSNVVLNIDL
CCCCEEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
NQNTPNNYVLSVDTFNSNAPNHAVSTASSIKIKDLVVQGSLQSTKWPFIYSGNINSKIGY
CCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCE
FEQNTESAESGEKFSLIQKNSQANLTTQVEGDTVNIINKTNLDELHINGNNLGKVTNNVE
EECCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCEECCEE
FNHIDGNALQELLNILVAIGKADSECLYLKHWCKNYNKQAWPLRIISLKLSLPLFLFLMK
EEECCHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHH
KAKWHWI
HCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800