Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is mlaD [H]

Identifier: 91786697

GI number: 91786697

Start: 823012

End: 823518

Strand: Direct

Name: mlaD [H]

Synonym: Bpro_0795

Alternate gene names: 91786697

Gene position: 823012-823518 (Clockwise)

Preceding gene: 91786696

Following gene: 91786698

Centisome position: 15.83

GC content: 54.64

Gene sequence:

>507_bases
ATGCAACGTTCAAAAAACGACGTGTGGGTTGGACTGTTTGTCCTGATCGGTGGCGCCGCCATGCTGTTTCTGGCGCTCAA
ATCGGCCAACCTGCTGACCCTGAGTTTTGACACCTCATACCGCGTTACGGCAAAGTTCGACAATATTGGTGGTCTCAAAC
CACGCGCGGCCGTGAAAAGTGCGGGCGTTGTTGTCGGCCGGGTTGAAAATATCACTTTTGACGACAAGTCCTACCAGGCC
AGTGTTCATCTGGCCATGGAAAGCCGCTATGCCTTTCCCAAGGACAGTTCGCTGAAAATACTGACCAGCGGTTTGCTGGG
CGAGCAATACATCGGCGTGGAGGCCGGTGGGGATGAGAAAAACCTGGCGGCGGGGGATGTGATCAAGCAGACCCAGTCAG
CCGTGGTGCTTGAAAGTCTGATCAGCCAGTTTTTGTATAGCAAAGCGGCGGACAGCAGTTCTGGATCAGGGGCTGCGCCG
TCACCAGGGACGCCAGAAAAAAAATGA

Upstream 100 bases:

>100_bases
GGATGTTCAGCCTTTAAGGCGGGACGCGCACCTTATGAATCCAACCATGCGAAAATTCATCCCCTTTGCCGGCGCAGGTT
TGGGTCATTGAAGGAAAAAA

Downstream 100 bases:

>100_bases
CGACGCGAACGATATCAACGACACAAAACACGATGAAGCGGTCCCTGTGGTGGGCGGCTGCAGCCTTGGCGCTGGCGCTG
CTGCAGGGTTGCGCAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA
SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP
SPGTPEKK

Sequences:

>Translated_168_residues
MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA
SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP
SPGTPEKK
>Mature_168_residues
MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKSAGVVVGRVENITFDDKSYQA
SVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEKNLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAP
SPGTPEKK

Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=174, Percent_Identity=48.2758620689655, Blast_Score=149, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17722; Mature: 17722

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVENITFDDKSYQASVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEK
CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
NLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAPSPGTPEKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHH
AGVVVGRVENITFDDKSYQASVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAGGDEK
CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
NLAAGDVIKQTQSAVVLESLISQFLYSKAADSSSGSGAAPSPGTPEKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]