Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053459

Identifier: 89053459

GI number: 89053459

Start: 925367

End: 926020

Strand: Direct

Name: 89053459

Synonym: Jann_0968

Alternate gene names: NA

Gene position: 925367-926020 (Clockwise)

Preceding gene: 89053458

Following gene: 89053460

Centisome position: 21.43

GC content: 63.91

Gene sequence:

>654_bases
ATGACCGAAAACGCCACTCCCCTGGTCGATCCCGCCAAGATCGAGGCGCTGTTCACCCGCGCCGACGGGCAGTTCCTGTT
CGCCCGATGGGGGCGGCCCATCGTGCCGGTTGTGTTCGGGGTGGAGGACAGCACGATCAGCGTCTTCAAAGGCGCGATTG
AGGCTGTAGTTGCGCTGGCCGATCACAAGATGGCGGAGCATGACCCGGAGCTTGGCGCAAACCTGATGGTGTTTTTCATC
CGTGACTGGGCGGAGCTGACCGCGACGCCGAACCTTGACCGTCTGATCCCGGATCTGGCCCCGCTCGTGGCGCGGCTGGA
GAGCGCGCAAGCCAACCAATACCGCAGTTTCCGCTTTGACGAGGATGGTGGCATCAAGGCCGCATTCGTTTTCATCCGCA
TGGATGACGCGATGGCAGAGGCCTCGGCAGAGACCATCGCGCTGAGCCAGATCGTGCAGACGATCGTGTTGTGGAGCGAT
ACGGCCTTCCTCGGAACCTCACCGCTCGCGGTCCTGACGGATGACGGACCGGCTGTCCTGAAACCGGACATCGCCGAGGT
GATCCGCGCGGCCTATGACCCGGTTCTGCCGGTCGCGGCGACGGATGCGTCCCACGCCTTGCGCCTGTTTGCACGGATCG
GCGTGCCGCAATGA

Upstream 100 bases:

>100_bases
AGCCCATACAGGTTCAGGAGTTCGGCCTGACCTCGGACCCGGTGATCGCCACTGCGATTGCCGAGCAGCGGCAGTAGCAG
AGGCGCATAGCGAGGATGCC

Downstream 100 bases:

>100_bases
CCCACCTCTGGCCCCTGCGCGTCTACTATGAAGACGTCGATCTGGCGGGGATCGTCTACTACGCCAACTACCTGAAATAC
CTGGAGCGGGGGCGCTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFI
RDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSD
TAFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ

Sequences:

>Translated_217_residues
MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFI
RDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSD
TAFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ
>Mature_216_residues
TENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFIR
DWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDT
AFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23504; Mature: 23373

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALA
CCCCCCCCCCHHHHEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
DHKMAEHDPELGANLMVFFIRDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFD
HHHHHHCCCCCCCCEEEHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEC
EDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDTAFLGTSPLAVLTDDGPAVL
CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
KPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ
CCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALA
CCCCCCCCCHHHHEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
DHKMAEHDPELGANLMVFFIRDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFD
HHHHHHCCCCCCCCEEEHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEC
EDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDTAFLGTSPLAVLTDDGPAVL
CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
KPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ
CCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA