Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is murB
Identifier: 87199157
GI number: 87199157
Start: 1181540
End: 1182433
Strand: Direct
Name: murB
Synonym: Saro_1135
Alternate gene names: 87199157
Gene position: 1181540-1182433 (Clockwise)
Preceding gene: 87199156
Following gene: 87199158
Centisome position: 33.17
GC content: 65.66
Gene sequence:
>894_bases GTGAGCAATTCGGTCCCTTCCAGCGTGAGGGGAAAACTGACCCCAGATGCCCCGCTCGCTCCGCTGGTCTGGTTCAAGTC CGGTGGCACCGCCGATTGGCTGTTCGAACCACGGGACGTGGCCGACCTCCAGGATTTTCTCGCGGGCCTTGCCCCGGAAG TGCCGGTCATGGCGCTGGGCCTCGGCTCCAATCTGATCGTGCGCGATGGTGGTGTGCCGGGCGTGGTGATCCGCCTCGGC AAGGCCTTCGCCAAGGTCGCGAAGGTCGACGAGGTCACGCTCGATTGCGGCGGCGGCGCGAGCGGCATTCTCGTTTCCTC GACCGCGCGCGACAACGGCATCGCCGGTCTCGAATTTCTCCGTTCGATTCCCGGCACGGTCGGCGGCTTCGTACGCATGA ACGGCGGCGCCTATGGCCGCGAGGTCAAGGACGTGCTTGTCGATTGCGACGTCGTGATCCGCTCGGGCGAGATCGTCACC CTGCCGCTGTCCGAACTCGGCTATACCTACCGTCATTCCAACCTGACCGACGGTTCGATCGTCGTCGCAGCCCGCTTTCG CGGGCATCCCGGCAATCCGGAAGCGATCCAGGCCGAGATGGACCGCATCAGCGCCGCGCGCGAGGCTTCGCAGCCGCTGC GTTCCAAGACCGGCGGCTCAACCTTCAAGAACCCCGATGGCGGCAAGGCCTGGGAACTGGTCGACAAGGCCGGCTGCCGC GGCCTCCAGATCGGCGGCGCGCAGGTCAGCGAAAAGCACACCAATTTCCTCATCAACACCGGCACTGCCACCAGCGCCGA GATCGAAGGCCTGGGCGAGGAAGTCCGCCGCCGCGTGAAGGCGAGTTCAGGCGTGGACCTCGAATGGGAAATCAAGAGGA TAGGCCGGCCATGA
Upstream 100 bases:
>100_bases CAGTGCAGGCGGGCGACATGGTCGTGTGCCTCGGCGCAGGTGACATCACCAAGTGGGCAGCAGGTCTTGCCGACGCGATC GCGCGCGAAAGGGCTGGGGC
Downstream 100 bases:
>100_bases CGGTGCCCGCCCATCGACTCGAGCCGAACGGAGAATGCTGAGAGTGTCCCTGCCCAAACTTCACGTTGCAGTCCTCATGG GTGGCTGGTCCAGCGAACGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSNSVPSSVRGKLTPDAPLAPLVWFKSGGTADWLFEPRDVADLQDFLAGLAPEVPVMALGLGSNLIVRDGGVPGVVIRLG KAFAKVAKVDEVTLDCGGGASGILVSSTARDNGIAGLEFLRSIPGTVGGFVRMNGGAYGREVKDVLVDCDVVIRSGEIVT LPLSELGYTYRHSNLTDGSIVVAARFRGHPGNPEAIQAEMDRISAAREASQPLRSKTGGSTFKNPDGGKAWELVDKAGCR GLQIGGAQVSEKHTNFLINTGTATSAEIEGLGEEVRRRVKASSGVDLEWEIKRIGRP
Sequences:
>Translated_297_residues MSNSVPSSVRGKLTPDAPLAPLVWFKSGGTADWLFEPRDVADLQDFLAGLAPEVPVMALGLGSNLIVRDGGVPGVVIRLG KAFAKVAKVDEVTLDCGGGASGILVSSTARDNGIAGLEFLRSIPGTVGGFVRMNGGAYGREVKDVLVDCDVVIRSGEIVT LPLSELGYTYRHSNLTDGSIVVAARFRGHPGNPEAIQAEMDRISAAREASQPLRSKTGGSTFKNPDGGKAWELVDKAGCR GLQIGGAQVSEKHTNFLINTGTATSAEIEGLGEEVRRRVKASSGVDLEWEIKRIGRP >Mature_296_residues SNSVPSSVRGKLTPDAPLAPLVWFKSGGTADWLFEPRDVADLQDFLAGLAPEVPVMALGLGSNLIVRDGGVPGVVIRLGK AFAKVAKVDEVTLDCGGGASGILVSSTARDNGIAGLEFLRSIPGTVGGFVRMNGGAYGREVKDVLVDCDVVIRSGEIVTL PLSELGYTYRHSNLTDGSIVVAARFRGHPGNPEAIQAEMDRISAAREASQPLRSKTGGSTFKNPDGGKAWELVDKAGCRG LQIGGAQVSEKHTNFLINTGTATSAEIEGLGEEVRRRVKASSGVDLEWEIKRIGRP
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=290, Percent_Identity=27.9310344827586, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_NOVAD (Q2G993)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496414.1 - ProteinModelPortal: Q2G993 - SMR: Q2G993 - STRING: Q2G993 - GeneID: 3916431 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1135 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: SKKHAGF - PhylomeDB: Q2G993 - ProtClustDB: PRK13905 - BioCyc: NARO279238:SARO_1135-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 31221; Mature: 31090
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 171-171 ACT_SITE 220-220 ACT_SITE 290-290
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSVPSSVRGKLTPDAPLAPLVWFKSGGTADWLFEPRDVADLQDFLAGLAPEVPVMALG CCCCCCCHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE LGSNLIVRDGGVPGVVIRLGKAFAKVAKVDEVTLDCGGGASGILVSSTARDNGIAGLEFL CCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEECCCCCCCCHHHHHH RSIPGTVGGFVRMNGGAYGREVKDVLVDCDVVIRSGEIVTLPLSELGYTYRHSNLTDGSI HHCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEECCCEEEEEHHHCCCEEECCCCCCCCE VVAARFRGHPGNPEAIQAEMDRISAAREASQPLRSKTGGSTFKNPDGGKAWELVDKAGCR EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC GLQIGGAQVSEKHTNFLINTGTATSAEIEGLGEEVRRRVKASSGVDLEWEIKRIGRP EEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCC >Mature Secondary Structure SNSVPSSVRGKLTPDAPLAPLVWFKSGGTADWLFEPRDVADLQDFLAGLAPEVPVMALG CCCCCCHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE LGSNLIVRDGGVPGVVIRLGKAFAKVAKVDEVTLDCGGGASGILVSSTARDNGIAGLEFL CCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEECCCCCCCCHHHHHH RSIPGTVGGFVRMNGGAYGREVKDVLVDCDVVIRSGEIVTLPLSELGYTYRHSNLTDGSI HHCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEECCCEEEEEHHHCCCEEECCCCCCCCE VVAARFRGHPGNPEAIQAEMDRISAAREASQPLRSKTGGSTFKNPDGGKAWELVDKAGCR EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC GLQIGGAQVSEKHTNFLINTGTATSAEIEGLGEEVRRRVKASSGVDLEWEIKRIGRP EEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA