Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yhcX [H]

Identifier: 87199066

GI number: 87199066

Start: 1082367

End: 1083260

Strand: Direct

Name: yhcX [H]

Synonym: Saro_1044

Alternate gene names: 87199066

Gene position: 1082367-1083260 (Clockwise)

Preceding gene: 87199065

Following gene: 87199067

Centisome position: 30.39

GC content: 66.67

Gene sequence:

>894_bases
GTGAGCTTTACCGTTGCCGCCGCGCAATATCCGGTCGACCGCCTGGAGGGGTGGGATGCCTATGAGGCGAAGCTGACGCG
CTGGGTGGAGGAGGCCGCGACGGCTGGCGCGAAGCTGGCGGTTTTTCCTGAGTATGGCGCGATGGAACTGGCGAGCCTCG
ATTCCGCGACGATGGGCGATCTTGCCCTGTCGATCGAGACGGTTTCCTCGCTGTTGCCGCGCGTCGATGCTCTCCATGCC
GAACTGGCTGGGCAGACGGGGATGCACATTCTGGCGGCATCTGCCCCGCGCAAGGATGCCGATGGGCGCTTTCGCAACGC
GGCGCGGCTGTTTGCGCCCAACGGCAGGTCCGGCGTGCAGGACAAGCTGGTGATGACGCGGTTCGAGCGTGAGCAGTGGC
ATATCGCGGCGGGTTCGACCTTGCGGGTGTTTGACACGGCGCTGGGGCGGCTGGCGGTGACCATCTGTTATGACAGCGAA
TTTCCGCTGCTGGCGCGCGCCTGCACGGAGGCCGGGGCGCAAGTCGTGCTGGTGCCGTCGTGCACGGATTCGCTCCATGG
ATATTGGCGTGTGCGGATCGGGGCGCAGGCGCGCGCGCTGGAAGGGCAGTGCTATGCGGTCCATTCGCCTACTGTCGGAG
AGGCGGAATGGTCCCCGGCGGTCGACGTCAATCGCGGTGCGGCAGGGGTCTATGGTCCGCCGGATCGCGGGATGCCCGAA
GACGGCGTTCTGGCGATCGGGGACGAAGGCGCGGCGCAATGGGTCCTTGCCGAAGTGGATACGGCAAGAGTGGCCGAGCT
TCGTGCCGATGGCGGCGTGCTGAACGCCTTGCATTGGACAGAGCAGCCGGGCGCGGCTCCGCTTCCGCCGGTGGAGATCG
TGGACTTGCGATAG

Upstream 100 bases:

>100_bases
GCTATGCCGTGGTGCCCGGGCTGACCACGCAGCTTTCGTGGAAGGAACACGGCGAGGAAGCGGAGCGGGTGAACGCGATG
CAATACTGGCTGCGGCAATG

Downstream 100 bases:

>100_bases
GCGGGCGGCTATCAGGCTGGTTCGTTACGAGGGAAACCATCCGCAATGTCGCTTGATGCCGCCGAGCAGGTCCACCGGCA
GTTCCTTGATGCGCTGGACA

Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHA
ELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSE
FPLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE
DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR

Sequences:

>Translated_297_residues
MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHA
ELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSE
FPLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE
DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR
>Mature_296_residues
SFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHAE
LAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEF
PLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPED
GVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17557111, Length=194, Percent_Identity=28.3505154639175, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 31680; Mature: 31549

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGD
CCEEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHCCCCCCCH
LALSIETVSSLLPRVDALHAELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQ
HEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCEEEECCCCCCCCH
DKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEFPLLARACTEAGAQVVLVPS
HHHHHHHHCCCEEEEECCCEEHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEC
CTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE
CCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR
CCEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
SFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGD
CEEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHCCCCCCCH
LALSIETVSSLLPRVDALHAELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQ
HEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCEEEECCCCCCCCH
DKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEFPLLARACTEAGAQVVLVPS
HHHHHHHHCCCEEEEECCCEEHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEC
CTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE
CCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR
CCEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]