Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199024

Identifier: 87199024

GI number: 87199024

Start: 1046149

End: 1047036

Strand: Direct

Name: 87199024

Synonym: Saro_1002

Alternate gene names: NA

Gene position: 1046149-1047036 (Clockwise)

Preceding gene: 87199023

Following gene: 87199028

Centisome position: 29.37

GC content: 68.24

Gene sequence:

>888_bases
ATGCCGCACACCGTTCGCACGCTGGCGGAAGGCCTGACCTTCGGTGAAGGCCCTCGCTGGCGGGCGGACGATCGCGGTGG
CCGGCTCTGGTTCTCCGATTTCTTCTCGCAGTCCATCCGCTCGGTGGGGATGGACGGCGACGTCGCGGTGGAGCTTGAGC
TGGACGACCGGCCATCCGGCCTTGGCTGGATGCCCGATGGCTCTCTGCTGTTCGTTGCCATGAACAGCAGAGAGGTGCGC
AGGCGCGGGCCTGATGGCACTGTCGCGTTGCATGCCGACCTTTCCGGCGTCGCCAGCCACACCTGCAACGACATGGTTGT
CGATGCGGATGGCGGTGCCTGGGTTGGCAACTTCGGCGTGGACTTTGCCGAACTCATGCACCGCTCCTTCGCCGACGTGG
CGGCGGACCCGCCGCTTGCCGACCTCGCCCGCGTCGCACCGGACGGCACGGCTACAGTGGCGGCCAGGGGCATGGCCTTT
GCCAACGGCAGCGTGATTACCCCGGACGGCAGGACGCTGATCGTCGCTGAATCCCTCGGACGGCGGCTCACGGCCTTCGA
TATCGCGCCGGACGGTTCGCTGTCGAACCGACGGACCTGGGCGGACACGCCGTCGCGCTCTCCCGATGGCATCGCTCTCG
ATGCCGAAGGTGCGGTCTGGTTCGCGAACGCCTTTGCCGGCGAATGCGTCCGTATTGCCGAAGGCGGAGAGGTGCTGGAC
GTCGTCGAGACCGGCGCGCGCAACTGCTACGCCTGCATGCTCGGCGGGCCCGAGGGGCGGCACCTGTTCATGCTGGTGGC
CGATACGGTGGAACCCGACGCCGGGGTTCTCCCCACGGGCGCGATTCTGGTGACCGAAGTCGAGGTCTCCCGCGCCGGGC
GTCCCTGA

Upstream 100 bases:

>100_bases
CGGGCGACTATGTCGTCGGCACGCCGCTTCCCATCGACGGCGGCATCGTCAACGCGTGGATTCCGGAAAACGCCGTCGAT
CCGAGCGGACACTGACGCCG

Downstream 100 bases:

>100_bases
CGCCTGCTCAGCCCCGCATCAGCCCGCGCACGAAGTCGATCAGCCCTGTCTGGCGCGTGCGGCGCATGCGCTCGGCCGCC
AGGATTTCCCGGACCTTGCC

Product: gluconolactonase

Products: NA

Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; 5-Valerolactone Hydrolase; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein; Gluconolactonase Protein; SMP-30/Gluconolaconase/LRE-Like Region Family; Smp-30/Gluconolaconase/Lre-Like Region-Containing Protein; Lactone Hydrolase; Senescence Marker Protein-

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVR
RRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAF
ANGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD
VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP

Sequences:

>Translated_295_residues
MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVR
RRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAF
ANGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD
VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP
>Mature_294_residues
PHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVRR
RGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFA
NGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLDV
VETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31129; Mature: 30998

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSG
CCCHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
LGWMPDGSLLFVAMNSREVRRRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGV
CCCCCCCCEEEEEECCCHHHHCCCCCEEEEEECCCHHHHCCCCCEEEECCCCEEEECCCC
DFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFANGSVITPDGRTLIVAESLG
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEECCCCEECCCCCEEEEEHHHC
RRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD
CEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCEEE
VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHHCCCCC
>Mature Secondary Structure 
PHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSG
CCHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
LGWMPDGSLLFVAMNSREVRRRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGV
CCCCCCCCEEEEEECCCHHHHCCCCCEEEEEECCCHHHHCCCCCEEEECCCCEEEECCCC
DFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFANGSVITPDGRTLIVAESLG
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEECCCCEECCCCCEEEEEHHHC
RRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD
CEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCEEE
VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA