Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198740

Identifier: 87198740

GI number: 87198740

Start: 756152

End: 756931

Strand: Direct

Name: 87198740

Synonym: Saro_0716

Alternate gene names: NA

Gene position: 756152-756931 (Clockwise)

Preceding gene: 87198739

Following gene: 87198756

Centisome position: 21.23

GC content: 61.54

Gene sequence:

>780_bases
ATGACCCGCCGTTTCGTCGACCTTTCGATCATGCTGGAGAACGAGGTCGTCACCGATCCGCCATTCATGCGCCCGCATAT
CGAGTACCAGAAGCATGGCGACACGCTTGGCGAACTGGGCTTCTTCTTTCCCGGCGTGACGGCTGAGGACACACCCGATG
CAGCCGGGTTCGCGGCGGCGGAGAAGGTGACGCTGACCACGCACAACGGCACGCACCTTGATGCGCCGTGGCATTTCCAT
CCGACGCAGGATGGTGGCAAGCCGGCGATGACGATTGACGAAGTGCCGCTGGAATGGTGCTTCCAGCCCGGCGTGAAGCT
TGATTTCCGTCACTTCCCGGATGGTTATGTGGTCACGGCGCAGGACGTCGAGGACGAACTCAAGCGCATCGGGCATGAGC
TGACGCCGCTGGAGATCGTTCTGGTCAACACCGCAGCGGGCAAGGCTGTGGGCAATCCGAACTTCGTCAACATTGGTTGC
GGGATGGGCTACGAGGCCACGATGTACCTCACCTCGCGCGGGGTCCGAGTGACCGGGACCGACGCATGGAGCTGGGACGC
GCCGTTCAGCTATACGGCTGAAAAGGTCAAGGAAACCGGTGATAAGTCGCTGATTTGGGAAGGCCACAAGGCCGGTCGCG
ACATCGGCTACTGCCATCTCGAGAAGCTGCACAACCTGGAAGTCCTGCCTGCCAGCGGCTTCACGGTCAGTTGCTTCCCC
CACAAGATCAAGGGTGCATCCGCCGGCTGGACCCGGGCCGTGGCGATCTTCGAGGATTGA

Upstream 100 bases:

>100_bases
GCAAAGCTGGCGTTCGGTGGCACCCTTGCCGCTATCGTCACGCCTGCCGGGCTTCGTGCCGAATTGATCAAGCGCTGAAG
GGCGCAAGGGAGAACATGCC

Downstream 100 bases:

>100_bases
GCGGGCGGGGCCCGTCCTAGGCGAAATCTTCTACCCGGAAGCCTTCGGCAAAGGCCTGTGCGAGCGCGGGCCGGTCGAGC
TGGCCGAGCATCGGCAGGCG

Product: putative cyclase

Products: NA

Alternate protein names: Cyclase; Polyketide Cyclase; Cyclase Superfamily; Metal-Dependent Hydrolase; Cyclase Superfamily Protein

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFH
PTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGC
GMGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP
HKIKGASAGWTRAVAIFED

Sequences:

>Translated_259_residues
MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFH
PTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGC
GMGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP
HKIKGASAGWTRAVAIFED
>Mature_258_residues
TRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAAEKVTLTTHNGTHLDAPWHFHP
TQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTAQDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCG
MGYEATMYLTSRGVRVTGTDAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFPH
KIKGASAGWTRAVAIFED

Specific function: Unknown

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28576; Mature: 28445

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAA
CCCEEEEEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEE
EKVTLTTHNGTHLDAPWHFHPTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTA
EEEEEEECCCCEECCCEEECCCCCCCCCCEEECCCCHHHHCCCCCEEEEEECCCCEEEEC
QDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCGMGYEATMYLTSRGVRVTGT
CCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEC
DAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP
CCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHCCEEEEECCCCEEEECC
HKIKGASAGWTRAVAIFED
CCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
TRRFVDLSIMLENEVVTDPPFMRPHIEYQKHGDTLGELGFFFPGVTAEDTPDAAGFAAA
CCEEEEEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEE
EKVTLTTHNGTHLDAPWHFHPTQDGGKPAMTIDEVPLEWCFQPGVKLDFRHFPDGYVVTA
EEEEEEECCCCEECCCEEECCCCCCCCCCEEECCCCHHHHCCCCCEEEEEECCCCEEEEC
QDVEDELKRIGHELTPLEIVLVNTAAGKAVGNPNFVNIGCGMGYEATMYLTSRGVRVTGT
CCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEC
DAWSWDAPFSYTAEKVKETGDKSLIWEGHKAGRDIGYCHLEKLHNLEVLPASGFTVSCFP
CCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHCCEEEEECCCCEEEECC
HKIKGASAGWTRAVAIFED
CCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA