Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is yieH [H]
Identifier: 86747715
GI number: 86747715
Start: 661554
End: 662207
Strand: Direct
Name: yieH [H]
Synonym: RPB_0589
Alternate gene names: 86747715
Gene position: 661554-662207 (Clockwise)
Preceding gene: 86747714
Following gene: 86747716
Centisome position: 12.41
GC content: 70.03
Gene sequence:
>654_bases TTGAGCTGCGACCTCGTCATCTTCGATTGCGACGGCGTGCTGGTCGACAGCGAAGTGATTTCCTGCCGCGTCCATGCCGA AACGCTGACCCGTCACGGCTATCCGATCACCACCGAACAGGTCGCCGAGCGCTTCCTCGGCCGCTCCGGCCGCGAGGCGC GGCGTGAGATCGAGGCCGAGCTCGGCCGCGCCTTCGACGACGCGCTCGAGGCGCAACTGGTCGCCGATGTGCTGCGCAGC TTCGCCGAAAGCCTCGAACCGATCCCCCACATCAACGAGGCGCTCGGCGCGCTCGCGCAGCCGGTCTGCGTCGCCTCCAG CGGCACGCTGGAGCGCATCGCCTTCGCGCTGACCCGCACCGGCCTGCACGCGCGCTTCGCGCCGCATCTGTTCTCCGCCG AGCAGGTCGAGAGCGGCAAGCCGGCGCCCGACCTGTTTCTGCATGCGGCGCGGCAGATGGGCGTGGCGCCGGCGCGCTGC GTGGTGATCGAGGACAGCGTGCCGGGCATCCTCGGCGCGACGGCCGCCGGCATGACGGTGCTGGGCTTCGTCGGCGGCAG CCATTGCGGGCCCGGCATGGCGGCGCGGCTGACCGCCGCCGGGGCCGCGACGGTATTCGCAGATATGCGGCAACTTCCTG AATTAATTCGATAA
Upstream 100 bases:
>100_bases GCCTGTGCCCGGCCATCCACGTCTTTGGCGTGGCCAACTCAGCAAGACGTGGATGCCCGGGACGAGCCCGGGCATGACGC GTAGAAGCGAAAGTAGTTGA
Downstream 100 bases:
>100_bases AATCGGAAACCGGCGGGTCGGGGCGGGGCCGCCGGCTGGATTTTGCCGGCTTTGCGCTGTAAGGCAGGGCAGCTTCACCC TCGAAACCCGGATTCCATGG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSCDLVIFDCDGVLVDSEVISCRVHAETLTRHGYPITTEQVAERFLGRSGREARREIEAELGRAFDDALEAQLVADVLRS FAESLEPIPHINEALGALAQPVCVASSGTLERIAFALTRTGLHARFAPHLFSAEQVESGKPAPDLFLHAARQMGVAPARC VVIEDSVPGILGATAAGMTVLGFVGGSHCGPGMAARLTAAGAATVFADMRQLPELIR
Sequences:
>Translated_217_residues MSCDLVIFDCDGVLVDSEVISCRVHAETLTRHGYPITTEQVAERFLGRSGREARREIEAELGRAFDDALEAQLVADVLRS FAESLEPIPHINEALGALAQPVCVASSGTLERIAFALTRTGLHARFAPHLFSAEQVESGKPAPDLFLHAARQMGVAPARC VVIEDSVPGILGATAAGMTVLGFVGGSHCGPGMAARLTAAGAATVFADMRQLPELIR >Mature_216_residues SCDLVIFDCDGVLVDSEVISCRVHAETLTRHGYPITTEQVAERFLGRSGREARREIEAELGRAFDDALEAQLVADVLRSF AESLEPIPHINEALGALAQPVCVASSGTLERIAFALTRTGLHARFAPHLFSAEQVESGKPAPDLFLHAARQMGVAPARCV VIEDSVPGILGATAAGMTVLGFVGGSHCGPGMAARLTAAGAATVFADMRQLPELIR
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=214, Percent_Identity=33.6448598130841, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789046, Length=174, Percent_Identity=31.6091954022989, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082080, Length=189, Percent_Identity=31.7460317460317, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788021, Length=182, Percent_Identity=30.2197802197802, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22961; Mature: 22829
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCDLVIFDCDGVLVDSEVISCRVHAETLTRHGYPITTEQVAERFLGRSGREARREIEAE CCCCEEEECCCCEEECHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHH LGRAFDDALEAQLVADVLRSFAESLEPIPHINEALGALAQPVCVASSGTLERIAFALTRT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHH GLHARFAPHLFSAEQVESGKPAPDLFLHAARQMGVAPARCVVIEDSVPGILGATAAGMTV CCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH LGFVGGSHCGPGMAARLTAAGAATVFADMRQLPELIR HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SCDLVIFDCDGVLVDSEVISCRVHAETLTRHGYPITTEQVAERFLGRSGREARREIEAE CCCEEEECCCCEEECHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHH LGRAFDDALEAQLVADVLRSFAESLEPIPHINEALGALAQPVCVASSGTLERIAFALTRT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHH GLHARFAPHLFSAEQVESGKPAPDLFLHAARQMGVAPARCVVIEDSVPGILGATAAGMTV CCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH LGFVGGSHCGPGMAARLTAAGAATVFADMRQLPELIR HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]