Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is fur [H]
Identifier: 86747714
GI number: 86747714
Start: 660846
End: 661343
Strand: Direct
Name: fur [H]
Synonym: RPB_0588
Alternate gene names: 86747714
Gene position: 660846-661343 (Clockwise)
Preceding gene: 86747713
Following gene: 86747715
Centisome position: 12.39
GC content: 62.25
Gene sequence:
>498_bases ATGGCACAAGTGCTCGTCGCTCCATCCCATTCAAACGATGCGTTGACGCCGATGTCCGATATGAAGGCCACTGATATGAA GGCCACCGAAATCGAAGCCCGCTGTGCCGCCACCGGCATGCGCATGACGGAGCAGCGTCGCGTGATCGCGCGGGTGCTCG CCGAGGCGGTCGACCATCCCGACGTCGAGGAGCTGTACACCCGCTGCGTCGCCGTCGACGACAAGATCTCGATCTCGACC GTGTACCGCACCGTCAAGCTGTTCGAGGACGCCGGCATCATCGAGCGGCACGATTTCCGCGAGGGCCGCGCCCGCTACGA GCAGATGCGCGACAGCCATCATGATCATCTGATCAATCTGCGCGACGGCAAGGTGATCGAGTTCACCAACGAGGAGATCG AACTGCTACAGGCCGAGATCGCCCGCAAGCTCGGCTACAAGCTGGTCGATCACCGGCTCGAGCTGTATTGCGTCCCGCTC GACGACGACAAGGCCTGA
Upstream 100 bases:
>100_bases TTCGAGATCGTCGGTCGGCGCGAGCGTTACTACCGGCAGCCCGACGGCCAACAATTGAACGCATTGATAATGCGTCGCGA CTTGTCCTAGTTTTCGCGCG
Downstream 100 bases:
>100_bases GCTGCGAGCACGGCGCGCCGGCGCGTTGCCATCGAGGCGCGAAGTCGGCTATTGACCTCTGTCTCCGTCATGGCCGGGCA TAGCCGTTGAAGAACGGCGT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAQVLVAPSHSNDALTPMSDMKATDMKATEIEARCAATGMRMTEQRRVIARVLAEAVDHPDVEELYTRCVAVDDKISIST VYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGKVIEFTNEEIELLQAEIARKLGYKLVDHRLELYCVPL DDDKA
Sequences:
>Translated_165_residues MAQVLVAPSHSNDALTPMSDMKATDMKATEIEARCAATGMRMTEQRRVIARVLAEAVDHPDVEELYTRCVAVDDKISIST VYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGKVIEFTNEEIELLQAEIARKLGYKLVDHRLELYCVPL DDDKA >Mature_164_residues AQVLVAPSHSNDALTPMSDMKATDMKATEIEARCAATGMRMTEQRRVIARVLAEAVDHPDVEELYTRCVAVDDKISISTV YRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGKVIEFTNEEIELLQAEIARKLGYKLVDHRLELYCVPLD DDKA
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=119, Percent_Identity=44.5378151260504, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18913; Mature: 18782
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVLVAPSHSNDALTPMSDMKATDMKATEIEARCAATGMRMTEQRRVIARVLAEAVDHP CCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DVEELYTRCVAVDDKISISTVYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC RDGKVIEFTNEEIELLQAEIARKLGYKLVDHRLELYCVPLDDDKA CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure AQVLVAPSHSNDALTPMSDMKATDMKATEIEARCAATGMRMTEQRRVIARVLAEAVDHP CEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DVEELYTRCVAVDDKISISTVYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC RDGKVIEFTNEEIELLQAEIARKLGYKLVDHRLELYCVPLDDDKA CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]