Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609168

Identifier: 86609168

GI number: 86609168

Start: 1791477

End: 1792229

Strand: Reverse

Name: 86609168

Synonym: CYB_1708

Alternate gene names: NA

Gene position: 1792229-1791477 (Counterclockwise)

Preceding gene: 86609173

Following gene: 86609167

Centisome position: 58.83

GC content: 59.36

Gene sequence:

>753_bases
ATGGATACTGAACTGCTGGTTCCCGACGTTGCCGACCTTGTGACGGAGGACGATACCCCGGTGGATAATTTCGCCTCCGA
AAAGCAGCAGCGCCTCTTGACAGGGGCTCTCTACAGCGCTTTGCGCGGCAAAACCTTTTTAGCAGCGGCAAATGTAGGCA
TCTACACCGCCATCGGTCGGCCCCCGATTGTGCCGGATGTTTTTCTCAGCCTGGACGTCACGGTGCCGGAGCAATGGTGG
GAGAAGCAAAACCGTTGCTACCTGCTCTGGCAATTTGACAAGCCGCCGGATGTGGTGATCGAGATCGTCTCCAACCGCGA
AGGCGACGAGCTGGAAGGCAAGCTGAGCCGTTATGAGCAGATGCGAGTTAGCTACTACGCGGTCTTCGATCCCAATCATG
AGCTGGGGCCAGAGGAGTTGCGCATTTTCGAACTGCGGGGCCGCCACTACGCGGAAATGACCGAGACCTGGCTAGAACAG
GTGGGGCTGGGCCTGACGGTGTGGGAAGGCGTTTTTGAGGGGAAACAAGCTCGCTGGCTGCGCTGGTGTGATGCCCAAGG
GCAGTTGCTGCTGACCGGCGATGAACGGGCTGAGTTGGAGCGGGAACGGGCGGAGCAGGAACGTCAACGGGCGGAACAAG
AACGCCAAAGAGCCGAACAAGAACGCCAACGGGCGGAACAGGAACGTCAACGGGCGGAGCGTCTGGCGGCAAGATTGCGG
GCTTTGGGTGAGGATCCCGATTTGGAGAGCTGA

Upstream 100 bases:

>100_bases
CTGGGCTTGCTCGAGGACTCTGTTTTCTCTGTTTCTCAGGGAGCAGAGGATCCCTGAGGTGAGCAGCTAAGATCACTGGC
ATCCCCACCCCCATCTGCCC

Downstream 100 bases:

>100_bases
AGCCCAGGGATCCCCTTCAGCACCCACCCTCCACTACACTCAGAGAGGGAACTGCTGCCGGAGTGGCAGGGATCGTTGGA
CTCACAGATGGGTTATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW
EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ
VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR
ALGEDPDLES

Sequences:

>Translated_250_residues
MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW
EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ
VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR
ALGEDPDLES
>Mature_250_residues
MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW
EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ
VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR
ALGEDPDLES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29091; Mature: 29091

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGR
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCC
PPIVPDVFLSLDVTVPEQWWEKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQ
CCCCCHHHEEEECCCCHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH
MRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQVGLGLTVWEGVFEGKQARWL
HHEEEEEEECCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH
RWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR
HEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGEDPDLES
HCCCCCCCCC
>Mature Secondary Structure
MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGR
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCC
PPIVPDVFLSLDVTVPEQWWEKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQ
CCCCCHHHEEEECCCCHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH
MRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQVGLGLTVWEGVFEGKQARWL
HHEEEEEEECCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH
RWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR
HEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGEDPDLES
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA