The gene/protein map for NC_008260 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608368

Identifier: 86608368

GI number: 86608368

Start: 921380

End: 921841

Strand: Reverse

Name: 86608368

Synonym: CYB_0888

Alternate gene names: NA

Gene position: 921841-921380 (Counterclockwise)

Preceding gene: 86608369

Following gene: 86608367

Centisome position: 30.26

GC content: 57.58

Gene sequence:

>462_bases
ATGAACTACTGGCTGATGAAATCTGAGCCCAGCATCTATAGCATCTGGGATTTGCAGCGGGAGGGCCAAACCCTTTGGGA
TGGCGTGCGCAACTACCAAGCCCGCAACTATCTGAAGGCAATGCAGCCTGGGGATCGCGCCTTTTTCTACCATTCCAATG
CCGAGCCACCCGGAATTGCCGGTTTGATGGAGATCCTGGAAACCCACGTGGTGGATCCCAGCCAGTTTGATCCGACCAGC
CCCTACTACGATCCCAAGTCCACTCCAGCAGATCCCCGGTGGTACACGGTGCGGGTGCAATTTTTGGCTGCTTTTGAAAG
AGTGATCCCTTTGGCCAAATTGCGGGCCACCTTCACCCCGGAGGAGCTGGAGGTGGTGCGGCGGGGCACACGCCTGTCGG
TGATACCTGTGGCTGCAGAGGTTGCGGAGCGCTTGCTCTCACTGGCAAACCTCTCCTCTTGA

Upstream 100 bases:

>100_bases
CCCAGAAAAGTCCGGCCCCTACGGCTTGAAGATGCTGCGCAACTTTGTCGAGTTTGTTGCCCGTTGTTCCCCCTTATCTG
CTCCCAGAGCCTAGTGCCCC

Downstream 100 bases:

>100_bases
TCTGGGGTAAGCTTCCCGACGGTCTCGCCCGACCATTTCCTCTCCGAGGCAGCTAGCCTCTACAGCGCCGACTCTGTTTT
GCTGCCAATTTGACCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS
PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS

Sequences:

>Translated_153_residues
MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS
PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS
>Mature_153_residues
MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS
PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33,
Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33,
Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33,
Organism=Homo sapiens, GI83267859, Length=103, Percent_Identity=51.4563106796116, Blast_Score=111, Evalue=2e-25,
Organism=Homo sapiens, GI40806219, Length=103, Percent_Identity=51.4563106796116, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17536; Mature: 17536

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIA
CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
GLMEILETHVVDPSQFDPTSPYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCH
EELEVVRRGTRLSVIPVAAEVAERLLSLANLSS
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIA
CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
GLMEILETHVVDPSQFDPTSPYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCH
EELEVVRRGTRLSVIPVAAEVAERLLSLANLSS
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA