Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is xpsN [H]

Identifier: 84622437

GI number: 84622437

Start: 845627

End: 846436

Strand: Direct

Name: xpsN [H]

Synonym: XOO_0780

Alternate gene names: 84622437

Gene position: 845627-846436 (Clockwise)

Preceding gene: 84622436

Following gene: 84622438

Centisome position: 17.12

GC content: 68.89

Gene sequence:

>810_bases
ATGCGCCTTGACATGATCGGCCTGCGCACCTGGTTGCTGGCCACCGTGGTCGGGTGGGCGATGCTGGTGTGCGCGCTGGC
CGTTGCCGGCCTGGGCAAGCGCGTCGAGCTGCTGCCCGACGACCCGGCCTTGGTGCAGCGCCTGCCCACGTTACCGGCAC
CGGCACCGGAGCGCCTGGGCGCGTTCGAAAAATATTCGGAAATCGCCGCGCATCCGGCGTTCGCCGAAGACCGCCTGCCG
CATCCGTTCTTCCTGTCCGGCAACGACGGCAGCGGCGCTGCTTCGACAGTGCGCCTGACCGGCGTGCTGCTGACCGATAC
CTTCAAGATGGCGACGTTGAGCCTGGACCCACAGGATTCGGTGCGCGTGCAACTGGGCGGTGATGCGGTCAAAGGCTGGC
GCCTGCTCGCCTTGCAGCCGCGTAGCGCCACCATCGAAGGCCCCAGCGGCACGCAAACGCTGGAATTGCACGTGTTCAAC
GGCCAGGGCGGGCAGCCGCCCACTGCCAATGCCGCCGCACGTGGTGCCGGTACTGCGACTGCGCCGGTGCCGTCTCCCGA
CGCTGCGGCAGTTGCCGTGCCGCCGCCGCAACAGCAACAACCGCAACCGCAACCGCAATCCGTGCCGCCGGTGCAACAGC
CCGGCTGGCAGGCACTGCCAACCGTGCAGCCGCAGCGTAGCGATGGCGCGCAGGAAGCTCCACGCCCCTCCGACGATCAG
ATGCGTGCCATCCGCGAACGCATCGAAGCCCGACGCCGCCAGCTGCAACAGCAGCGCCAGAGCGGCTCTCCCCCCGGTCA
GACCCAATGA

Upstream 100 bases:

>100_bases
ATTGCCTTCGAACTGGCCGGTTATCTGCGCCCGGGCGCCAGCGCCGCACCGCTGAATAACGAAACCGCACCTGCCGCTCC
CAACGCCGCGGAGGCCAGCA

Downstream 100 bases:

>100_bases
GTGAACGCATGACGCCGCGCCTGTTTCCCGTATCCCTGCTGATTGGCCTGCTGGCCGGTTGCGCCACCACTCCGCCGCCG
GACGTGCGCCGCGACGCGCG

Product: general secretion pathway protein N

Products: NA

Alternate protein names: Protein xpsN [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP
HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN
GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ
MRAIRERIEARRRQLQQQRQSGSPPGQTQ

Sequences:

>Translated_269_residues
MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP
HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN
GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ
MRAIRERIEARRRQLQQQRQSGSPPGQTQ
>Mature_269_residues
MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP
HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN
GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ
MRAIRERIEARRRQLQQQRQSGSPPGQTQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28597; Mature: 28597

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHH
AFEKYSEIAAHPAFAEDRLPHPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDS
HHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCC
VRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFNGQGGQPPTANAAARGAGTAT
EEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCC
APVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
MRAIRERIEARRRQLQQQRQSGSPPGQTQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHH
AFEKYSEIAAHPAFAEDRLPHPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDS
HHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCC
VRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFNGQGGQPPTANAAARGAGTAT
EEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCC
APVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
MRAIRERIEARRRQLQQQRQSGSPPGQTQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10692359; 12024217; 1313415 [H]