Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489488

Identifier: 84489488

GI number: 84489488

Start: 793151

End: 794008

Strand: Direct

Name: 84489488

Synonym: Msp_0679

Alternate gene names: NA

Gene position: 793151-794008 (Clockwise)

Preceding gene: 84489487

Following gene: 84489489

Centisome position: 44.88

GC content: 32.28

Gene sequence:

>858_bases
ATGGTCAATGAAAAAAACTCTGATAATTATCAAGAGTTGACTGAAGCCCGAAAGGATTATAAATTACATCTGACTATTTT
AGTATGTATAGTGATAGCTGAATATATTGGCATGCTAACAGTAAATCTCTATGGAATTACAATAGTATTCATGCCATTAT
TATATTCATTGGTTTTAGCAATTGCACTCTATTTAGCAAAACCTGTTAAATGGATTACAGATAAACAATCAAATAAAGCT
AGTACAATTATGATGCTCTTAATTGGTCCATTACTAGCTAAACTAGCAATTGCAAGTGGACAAAATATTCAGATTATTTT
TAATGCTGGACCTGCAATTCTTTTACAAGAGATAGGAAACTTGGGAACAATATTTGCAGCATTACCTGTAGCATTGTTAC
TTGGTTTTAAACGTGAATCTATTGGAATGACAAGTTCTATATGTAGAGAGCCACAGATGGCTGTTGTTATAGATACCTTT
GGATTTAATTCACCAGAAACAAAAGGATTTTTCACAGTATTTCTTATAGGTACTGTTTTAGGAACACCATTTATTAGTTT
ACTAGCAAGTGTATTGGCACATGTTATTCCATTACACCCATATGCTTATGGAATGGCATGTGGTATTGGTAGTGCAAGTA
TGAATGCAGCAGCAGTAGCATCGTTGTGTGCTATTTTCCCTTCAGCAACAGTTCAACTAGAAGCATTTAGTGGAATGGCA
AATCTGCTTTCAATGGTTACAGGTATGTATGTTTATATATTAGTAGCTATTCCATTAACAGAATGGTTATATCGTAAACT
TGAACCAGTGATTAGTCGAATTTTATTTAAAAAAGAAAATAAAAAAATAAAGGATTGA

Upstream 100 bases:

>100_bases
ATAATTAATTTCAACTTTAAAAAACCATTAATTATATATGATTTATTATAATAATGTAGGGGATTTAAAAAAAATATATA
TAATTTTTGGGGGATGTATT

Downstream 100 bases:

>100_bases
TTTAAAAGTGTCAAAGATTTTATCTAAAGAAGTGGTGATGGAATGGATACTTATTTTAATTATCTTTTCTTTCATGTCTG
CTATAGGTAACTATATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA
STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF
GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA
NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD

Sequences:

>Translated_285_residues
MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA
STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF
GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA
NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD
>Mature_285_residues
MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA
STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF
GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA
NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31047; Mature: 31047

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALYLAKPVKWITDKQSNKASTIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC
LGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTFGFNSPETKGFFTVFLIGTVL
HHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
GTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH
NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALYLAKPVKWITDKQSNKASTIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC
LGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTFGFNSPETKGFFTVFLIGTVL
HHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
GTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH
NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA