Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489319

Identifier: 84489319

GI number: 84489319

Start: 602930

End: 603457

Strand: Direct

Name: 84489319

Synonym: Msp_0509

Alternate gene names: NA

Gene position: 602930-603457 (Clockwise)

Preceding gene: 84489317

Following gene: 84489324

Centisome position: 34.11

GC content: 23.3

Gene sequence:

>528_bases
TTGAATAGAATGTCAAGTGAAGCTAATAAAAAGTTTGTATCTAATATTAAAAAGGAAATACAACAAAAAATTAAGACAGA
GAATAAAAATATTAAAGCACTCAATGATGAAAACATGGAATTAACACGATCTATTGAGGGTTATTCTAATTTTTATCATG
AAGTAGAACATTTTTTCACTGAAAGTATGGCTGATTTTAATGTTAAACAGGATGAACTTCCAGACTATTTTAAAAGTAAT
ATTAATGAGGTGTACCAGAATTATTCACAGATTAGATTAGATGCTATTGATGAAAAAAATCACTTAAATGAATATATTCT
ACATTGTAAAAAAGAAATACAAACTAATCAAAGATCTTTAAAATTCTATAAGTCTCAATACTCTGATAGTGATATATTTA
GTGAATGTCTTCCACTTGTTGATGTATATGAAAAGAAAATAGAATTATATGAAAAAAATATTCAAAAAACTAATGATATA
ATATCTACTTTAGATGAAATAATTAATATTCTTAGTAATTGGAAATAA

Upstream 100 bases:

>100_bases
TTAATTAATTTTAACAAGACTTTTTTTTAATAAACTTTTTTAATTATTTAATTCAATAAATATAATTAGAAAACATTTAA
TATTTTTTTAGTTAAGTGGG

Downstream 100 bases:

>100_bases
AAAAAAGAGTTTTAATAAAACTCTTATACCACTACTTTTTCAAGTCTTTTCATGGCTTTTTCTAAGTTTTTATAACTTTG
TGCATAGGATAATCTCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN
INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI
ISTLDEIINILSNWK

Sequences:

>Translated_175_residues
MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN
INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI
ISTLDEIINILSNWK
>Mature_175_residues
MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN
INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI
ISTLDEIINILSNWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20960; Mature: 20960

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESMADFNVKQDELPDYFKSNINEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSL
HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDIISTLDEIINILSNWK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESMADFNVKQDELPDYFKSNINEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSL
HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDIISTLDEIINILSNWK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA