Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78065865

Identifier: 78065865

GI number: 78065865

Start: 1352913

End: 1353875

Strand: Reverse

Name: 78065865

Synonym: Bcep18194_A4394

Alternate gene names: NA

Gene position: 1353875-1352913 (Counterclockwise)

Preceding gene: 78065866

Following gene: 78065860

Centisome position: 36.65

GC content: 68.02

Gene sequence:

>963_bases
ATGAGGTTCGCCCTGCTCCTCGTTGTCGCCTTCGCCATGTGGTGCGGCGTGCCGCACGATGCGCGGGCCGAGTCGTGCAC
GGCCACCGCGTCGACGGTGAGCTTCGGCTCGGTCAGCCCGATCTCGCGCGCGTCGGTCGCCGCGACCGGCACCGTCAGCA
TCACCTGCACGTGGTCGGCCATCACGCTGACGCCGAACGTGCTCGTATGCCTGAGTCTCGGCGGCACGAGCCCGCGCAGC
CTCGTCAACGGCACCAACGCGATGCAGTACGACCTCTTTCTCGATGGCGGACACTCGGTCGCGTGGGGCTCGATTTACTC
CGGCACGACGCCGGCATCGGTGACGCTCGTCAAACCCGCGCTCGGCACGAGCGCAAGCGCCACGGTCACGATCTACGGAC
AGATCACGTCGAACCAGCCGACCGTGCCGACGACCGGCAACAGCACGACCACCTACTCGCAGACGTTCGGGGGCAACACG
ACATCGATCAACGCGGGGTTCTACCTGCTCGGTGCGCCAAGCTGCGCGTCGCTGACGGCGTCGAACGGCACCTTCCCGTT
CAGCGCGACCGCCAACGTCATCAACAACTGCAACATCAGCGCGACCAACGTCAGCTTCGGCACGGCGAGCGTGCTGTCGG
GCGCACTCGCGGCGACCGGTTCGATCACCGCGCAGTGCACCAACGGCGACGCGTGGAAGATCGCGCTGAACGGCGGTAGC
AGCGGCAGCGTGACCGCGCGCCACATGCAGCGCAGCGGCGGAGGCGGCACGATCGGCTACGGGCTTTACACGGATGCCGC
GCGCTCGATCGCGTGGGGCGACGGCACGGGCGGCAGTTCGACGGTCACGGGTGTCGGTACGGGTACGTCGCAGGTCGTGA
CCGTGTATGGCGCGGTGCCGGCGCAAACGACGCCCGCGCCCGGCAACTACAGCGACACGATCACCGCGACGATCAGTTTC
TAG

Upstream 100 bases:

>100_bases
TCGATTACGGCACGCAGCGCTGCGCAGCGGAATTCGCGTTCACGGCGCCCGGCAACGGCACGCTGCCGACCATCGGCCCG
CTCACCTGCCGGGCTGCGCC

Downstream 100 bases:

>100_bases
CGTTCCGATCCGCAGCATCAGCAGGCGCGCACGCCGCGCGCGCCGCGCGCGCCGTTCAGAACGTGACGGTCCAGGTGGGC
AGCACACCCGCGCCGATGCT

Product: putative secreted pili protein involved in motility and biofilm formation

Products: NA

Alternate protein names: Spore Coat U Domain-Containing Protein; Spore Coat Protein U; Spore Coat Protein U Domain-Containing; Spore Coat Protein U Domain Protein; Spore Coat U Domain Protein

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS
LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT
TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS
SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF

Sequences:

>Translated_320_residues
MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS
LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT
TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS
SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF
>Mature_320_residues
MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS
LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT
TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS
SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31850; Mature: 31850

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSA
CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEEEEEEE
ITLTPNVLVCLSLGGTSPRSLVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPA
EEECCCEEEEEEECCCCCHHHHCCCCCEEEEEEEECCCEEEECEEECCCCCCEEEEEECC
LGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNTTSINAGFYLLGAPSCASLTA
CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCCEEEC
SNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS
CCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCEEEEECCCCEEEEEEECCC
SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVP
CCCEEEEEHHCCCCCCEEEECEECCHHHEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
AQTTPAPGNYSDTITATISF
CCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSA
CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEEEEEEE
ITLTPNVLVCLSLGGTSPRSLVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPA
EEECCCEEEEEEECCCCCHHHHCCCCCEEEEEEEECCCEEEECEEECCCCCCEEEEEECC
LGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNTTSINAGFYLLGAPSCASLTA
CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCCEEEC
SNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS
CCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCEEEEECCCCEEEEEEECCC
SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVP
CCCEEEEEHHCCCCCCEEEECEECCHHHEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
AQTTPAPGNYSDTITATISF
CCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA