| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is hipO [H]
Identifier: 78065858
GI number: 78065858
Start: 1345097
End: 1346317
Strand: Reverse
Name: hipO [H]
Synonym: Bcep18194_A4387
Alternate gene names: 78065858
Gene position: 1346317-1345097 (Counterclockwise)
Preceding gene: 78065860
Following gene: 78065857
Centisome position: 36.44
GC content: 68.47
Gene sequence:
>1221_bases ATGCCCATTTCTCCACCGATCCAGGCGCTGGCAGCCGACATGCGCGACTGGCGCCGGCTCATTCACAGCAAACCGGAAAT CGCATTCCAGGAACGCGGCACGGCCGACTTCATCGCGACGCGGTTGCGCGAATTCGGCATCGACGTTCATACCGGCGTCG GCCAGACCGGCGTGGTCGGCATCGTCGACGGAACGCTCGGCGCCGGCCGCACCGTCGCCTTGCGCGCCGACATGGATGCG CTGCCGATGCGGGAACTGGGCCGCCCGGTCTACCGGTCGGTGTTCGAAGGCATCTTTCACGGCTGCGGCCACGATGGCCA CGTCGCGATCCTGCTCGGCACCGCACGCCATCTCGCCGAGCATCGCCACTTCCGCGGCCGCGTCGTGCTGATCTTCCAGC CGGCCGAGGAAATCGTCTGCGGCAGCCGCGCGATGCTCGACGACGGGTTGCTCGAGCGCTTCCCGTTCGACGAAATCTAC AGCCTCCACAACGACCCGATGCTGCCGCCGTCGAGGATCGGCGTGCGCGCCGGCGCGCAACAGGCATCGTCCGACCGGTT TCAGATCCGGATCCACGGCATCGGCACCCACGCCGGCATGCCGCACCTCGGCATCGATCCGGTCGCGATCGGCGCGCACC TGGTTGCGATGCTGCAAACCGTCGCGAGCCGGTCGGTCGATCCGCTGGAAAGCGTCGTGATCTCGATCGCGCGCTTTCAC GCCGGCGACGCATTCAACGTGATTCCGCACGAAGCCGTGCTCGGCGGCACCGTGCGCGCGCTGTCGAACGACACGCGCAC CTTCGCGCTCGAGCGGATGCGTGCGATCTGCGACGGCGTCGCGCTCGCCAATCGCACGCGCATCGAATTCGAATTGCTGG ACGGCACGCCGGCGATCGTCAACCACGCCGACGCGGTGCAGTGCGTGATGGACGCCGCGCGCGAGGTCGTCGGGGCGGAA AACGTGATCGGCAACGTCACGCCGCTGATGGCCGGCGACGACATCGCGAACTTCCTCGATGCACGCCCCGGCTGCCACTT TCTGCTCGGCCAGGGCGGCCACATGTGCCATCACCCCGAATACGACTTCAACGACGACGTCGCGCCGATCGGCGTCGCGA TGTTCGCATCGATCCTGCGCGCGCGGCTGGGCGCCGGCGCCGAACCGATACCGACCGGCCTCGACGAACGCAGTGCGCTG GCGGCGGCCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGAATTTCTCCACATAGCATCGGTTTCAAGGGAACCCCGTTTCCCGCCCCGAAGCAGCAGCGTGCTTCGCTACCCATTT TGCAAAGGCGACACCCGATC
Downstream 100 bases:
>100_bases CGAGCACCGCCCGAACCCTCATCGCCCCATCCGGCGTTCCACGCCGCACATAACGACACGACGGATCATCCGTCCACGGA GACAGCGTCATGAGCACCAC
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MPISPPIQALAADMRDWRRLIHSKPEIAFQERGTADFIATRLREFGIDVHTGVGQTGVVGIVDGTLGAGRTVALRADMDA LPMRELGRPVYRSVFEGIFHGCGHDGHVAILLGTARHLAEHRHFRGRVVLIFQPAEEIVCGSRAMLDDGLLERFPFDEIY SLHNDPMLPPSRIGVRAGAQQASSDRFQIRIHGIGTHAGMPHLGIDPVAIGAHLVAMLQTVASRSVDPLESVVISIARFH AGDAFNVIPHEAVLGGTVRALSNDTRTFALERMRAICDGVALANRTRIEFELLDGTPAIVNHADAVQCVMDAAREVVGAE NVIGNVTPLMAGDDIANFLDARPGCHFLLGQGGHMCHHPEYDFNDDVAPIGVAMFASILRARLGAGAEPIPTGLDERSAL AAAAAR
Sequences:
>Translated_406_residues MPISPPIQALAADMRDWRRLIHSKPEIAFQERGTADFIATRLREFGIDVHTGVGQTGVVGIVDGTLGAGRTVALRADMDA LPMRELGRPVYRSVFEGIFHGCGHDGHVAILLGTARHLAEHRHFRGRVVLIFQPAEEIVCGSRAMLDDGLLERFPFDEIY SLHNDPMLPPSRIGVRAGAQQASSDRFQIRIHGIGTHAGMPHLGIDPVAIGAHLVAMLQTVASRSVDPLESVVISIARFH AGDAFNVIPHEAVLGGTVRALSNDTRTFALERMRAICDGVALANRTRIEFELLDGTPAIVNHADAVQCVMDAAREVVGAE NVIGNVTPLMAGDDIANFLDARPGCHFLLGQGGHMCHHPEYDFNDDVAPIGVAMFASILRARLGAGAEPIPTGLDERSAL AAAAAR >Mature_405_residues PISPPIQALAADMRDWRRLIHSKPEIAFQERGTADFIATRLREFGIDVHTGVGQTGVVGIVDGTLGAGRTVALRADMDAL PMRELGRPVYRSVFEGIFHGCGHDGHVAILLGTARHLAEHRHFRGRVVLIFQPAEEIVCGSRAMLDDGLLERFPFDEIYS LHNDPMLPPSRIGVRAGAQQASSDRFQIRIHGIGTHAGMPHLGIDPVAIGAHLVAMLQTVASRSVDPLESVVISIARFHA GDAFNVIPHEAVLGGTVRALSNDTRTFALERMRAICDGVALANRTRIEFELLDGTPAIVNHADAVQCVMDAAREVVGAEN VIGNVTPLMAGDDIANFLDARPGCHFLLGQGGHMCHHPEYDFNDDVAPIGVAMFASILRARLGAGAEPIPTGLDERSALA AAAAR
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=427, Percent_Identity=26.463700234192, Blast_Score=92, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 43587; Mature: 43455
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISPPIQALAADMRDWRRLIHSKPEIAFQERGTADFIATRLREFGIDVHTGVGQTGVVG CCCCHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHHHHHHCCEEECCCCCCCEEE IVDGTLGAGRTVALRADMDALPMRELGRPVYRSVFEGIFHGCGHDGHVAILLGTARHLAE EEECCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH HRHFRGRVVLIFQPAEEIVCGSRAMLDDGLLERFPFDEIYSLHNDPMLPPSRIGVRAGAQ HHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHCHHCCCC QASSDRFQIRIHGIGTHAGMPHLGIDPVAIGAHLVAMLQTVASRSVDPLESVVISIARFH CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC AGDAFNVIPHEAVLGGTVRALSNDTRTFALERMRAICDGVALANRTRIEFELLDGTPAIV CCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH NHADAVQCVMDAAREVVGAENVIGNVTPLMAGDDIANFLDARPGCHFLLGQGGHMCHHPE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCC YDFNDDVAPIGVAMFASILRARLGAGAEPIPTGLDERSALAAAAAR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure PISPPIQALAADMRDWRRLIHSKPEIAFQERGTADFIATRLREFGIDVHTGVGQTGVVG CCCHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHHHHHHCCEEECCCCCCCEEE IVDGTLGAGRTVALRADMDALPMRELGRPVYRSVFEGIFHGCGHDGHVAILLGTARHLAE EEECCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH HRHFRGRVVLIFQPAEEIVCGSRAMLDDGLLERFPFDEIYSLHNDPMLPPSRIGVRAGAQ HHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHCHHCCCC QASSDRFQIRIHGIGTHAGMPHLGIDPVAIGAHLVAMLQTVASRSVDPLESVVISIARFH CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC AGDAFNVIPHEAVLGGTVRALSNDTRTFALERMRAICDGVALANRTRIEFELLDGTPAIV CCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH NHADAVQCVMDAAREVVGAENVIGNVTPLMAGDDIANFLDARPGCHFLLGQGGHMCHHPE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCC YDFNDDVAPIGVAMFASILRARLGAGAEPIPTGLDERSALAAAAAR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]