| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yxlA [H]
Identifier: 78065857
GI number: 78065857
Start: 1343592
End: 1345007
Strand: Reverse
Name: yxlA [H]
Synonym: Bcep18194_A4386
Alternate gene names: 78065857
Gene position: 1345007-1343592 (Counterclockwise)
Preceding gene: 78065858
Following gene: 78065856
Centisome position: 36.41
GC content: 65.89
Gene sequence:
>1416_bases ATGAGCACCACCGCGTCCGACAAGGACACCCTGATCGAGCACCGCTCGATCGAACCCGTTCCCGACAGCGAGCGCCACGG CGGCCTGCTGAGCCAGTTCACGCTGTGGGTCAGCGCCAACCTGACCGTCGTCTGCGCGGTCACCGGCGCGCTGACCGTCG TGCTCGGCGGCGACGTCTTCTGGTCGATCGTCGGGCTGTTCGTCGGCCAGATCGCCGGCGGCACGATCATGGCGCTGCAT GGCGCGCAGGGGCCGCAAACCGGGCTGCCGCAGATGATCCTCAGCCGCGTACAGTTCGGCATCTACGGCGCGATCATTCC GCTCGCGCTCGTCTGCGTGATGTACATCGGCTTCCTGACGAGCGGCACGGTGCTGATGAGCCAGGCGCTCGGCCAGTTGA TGCACGTGAGCCCCGCCCAGGCCATCGTGATGCTCGGCGTGGTCGTAACCTTGCTCGCGCTGTTCGGCTATCGCGCCATT CATGCGGTCGGGCGCATCTACAGCGTGGTCGGCGGGCTGATGTTCGTCTATCTGTTGTTCAGCCTGACGCGCGGCCACAA CGCGACGCTGCTGTTCGACAACCGGCACTTCACGTGGCCGACCTTCCTGTTCGCGGTATCGCTGTCGGCGTCGTGGCAGA TCACGTACGGCCCGTACGTCGCCGATTACTCGCGCTACCTGCCGCGCGCGACGTCGCCACTCCGGACTTTCCTGACGATC GGCGCCGGCTCCGTGCTCGGTTCCCAGATCGCGATGACGTTCGGCGTGTTCGCCGCAGCGCTGGCCGGCAAGCAGTTCGC CGGACACGAAGTCGCCTATATGGTCGGCATCGGTTCGGGCGGCATCGCGCTGGTGGCGACGACGCTGTACCTGACCATCA TGTTCGGCAAGCTGATCGCGTCGACACTGTGCGTGTACGGCGGCTTCATGTCGGTTGCCACGATCTCCGCCGCGCTGCGC GGCAAGCCGTCGATCGGGCTTGGCGCGCGGATCGTGCTGACCATCGGCGTCGTCGCGACCTACACGATCCTCGCGCTCGT CGCCGATCACGCGTTCCTGCGCACCTTCAGCCACTTCATCCTGTTCCTGCTGGCGTTCTTCACGCCGTGGAGCGCGATCA ATCTCGTCGACTACTACTGGGTGTCGCACGAGCCGATCGACGTGTCGGCGCTGTCGGACGTCAACGGCCGCTACGGCAAG TGGAACGCGATCGGTATCACGTGCTACGTGGTCGGCGTGCTTGCGCAGATTCCGTTCATGTCGACCGAACTCTATACGGG CCCGCTGTTTAACCTGCTCGGCGGCATCGACGTGTCGTGGATCGTCGGCATGGTCTTGCCCGGCGCGCTCTACTACGCGC TGACCCGCCACCGCAGCCCGCGCGCTTCGCGGCACGCACAGATCGACCGCGCATGA
Upstream 100 bases:
>100_bases CCGCGCGCTGACGAGCACCGCCCGAACCCTCATCGCCCCATCCGGCGTTCCACGCCGCACATAACGACACGACGGATCAT CCGTCCACGGAGACAGCGTC
Downstream 100 bases:
>100_bases CGCGATAGAAGCGGCTTCGATCGCATTCCACTCCCCACGCAATATAATCAGGATTCCGATTCATATGGAAAATAAAATCA TCCTGTCGTGCGCACTCGCG
Product: cytosine/purines, uracil, thiamine, allantoin transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSTTASDKDTLIEHRSIEPVPDSERHGGLLSQFTLWVSANLTVVCAVTGALTVVLGGDVFWSIVGLFVGQIAGGTIMALH GAQGPQTGLPQMILSRVQFGIYGAIIPLALVCVMYIGFLTSGTVLMSQALGQLMHVSPAQAIVMLGVVVTLLALFGYRAI HAVGRIYSVVGGLMFVYLLFSLTRGHNATLLFDNRHFTWPTFLFAVSLSASWQITYGPYVADYSRYLPRATSPLRTFLTI GAGSVLGSQIAMTFGVFAAALAGKQFAGHEVAYMVGIGSGGIALVATTLYLTIMFGKLIASTLCVYGGFMSVATISAALR GKPSIGLGARIVLTIGVVATYTILALVADHAFLRTFSHFILFLLAFFTPWSAINLVDYYWVSHEPIDVSALSDVNGRYGK WNAIGITCYVVGVLAQIPFMSTELYTGPLFNLLGGIDVSWIVGMVLPGALYYALTRHRSPRASRHAQIDRA
Sequences:
>Translated_471_residues MSTTASDKDTLIEHRSIEPVPDSERHGGLLSQFTLWVSANLTVVCAVTGALTVVLGGDVFWSIVGLFVGQIAGGTIMALH GAQGPQTGLPQMILSRVQFGIYGAIIPLALVCVMYIGFLTSGTVLMSQALGQLMHVSPAQAIVMLGVVVTLLALFGYRAI HAVGRIYSVVGGLMFVYLLFSLTRGHNATLLFDNRHFTWPTFLFAVSLSASWQITYGPYVADYSRYLPRATSPLRTFLTI GAGSVLGSQIAMTFGVFAAALAGKQFAGHEVAYMVGIGSGGIALVATTLYLTIMFGKLIASTLCVYGGFMSVATISAALR GKPSIGLGARIVLTIGVVATYTILALVADHAFLRTFSHFILFLLAFFTPWSAINLVDYYWVSHEPIDVSALSDVNGRYGK WNAIGITCYVVGVLAQIPFMSTELYTGPLFNLLGGIDVSWIVGMVLPGALYYALTRHRSPRASRHAQIDRA >Mature_470_residues STTASDKDTLIEHRSIEPVPDSERHGGLLSQFTLWVSANLTVVCAVTGALTVVLGGDVFWSIVGLFVGQIAGGTIMALHG AQGPQTGLPQMILSRVQFGIYGAIIPLALVCVMYIGFLTSGTVLMSQALGQLMHVSPAQAIVMLGVVVTLLALFGYRAIH AVGRIYSVVGGLMFVYLLFSLTRGHNATLLFDNRHFTWPTFLFAVSLSASWQITYGPYVADYSRYLPRATSPLRTFLTIG AGSVLGSQIAMTFGVFAAALAGKQFAGHEVAYMVGIGSGGIALVATTLYLTIMFGKLIASTLCVYGGFMSVATISAALRG KPSIGLGARIVLTIGVVATYTILALVADHAFLRTFSHFILFLLAFFTPWSAINLVDYYWVSHEPIDVSALSDVNGRYGKW NAIGITCYVVGVLAQIPFMSTELYTGPLFNLLGGIDVSWIVGMVLPGALYYALTRHRSPRASRHAQIDRA
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320897, Length=248, Percent_Identity=28.2258064516129, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320902, Length=262, Percent_Identity=27.8625954198473, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 50444; Mature: 50313
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTASDKDTLIEHRSIEPVPDSERHGGLLSQFTLWVSANLTVVCAVTGALTVVLGGDVF CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEEEEHHHHHHHCCHHHH WSIVGLFVGQIAGGTIMALHGAQGPQTGLPQMILSRVQFGIYGAIIPLALVCVMYIGFLT HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTVLMSQALGQLMHVSPAQAIVMLGVVVTLLALFGYRAIHAVGRIYSVVGGLMFVYLLF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLTRGHNATLLFDNRHFTWPTFLFAVSLSASWQITYGPYVADYSRYLPRATSPLRTFLTI HHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHH GAGSVLGSQIAMTFGVFAAALAGKQFAGHEVAYMVGIGSGGIALVATTLYLTIMFGKLIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH STLCVYGGFMSVATISAALRGKPSIGLGARIVLTIGVVATYTILALVADHAFLRTFSHFI HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLLAFFTPWSAINLVDYYWVSHEPIDVSALSDVNGRYGKWNAIGITCYVVGVLAQIPFM HHHHHHHCCCCHHHHHHEEEECCCCCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCC STELYTGPLFNLLGGIDVSWIVGMVLPGALYYALTRHRSPRASRHAQIDRA CCHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure STTASDKDTLIEHRSIEPVPDSERHGGLLSQFTLWVSANLTVVCAVTGALTVVLGGDVF CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEEEEHHHHHHHCCHHHH WSIVGLFVGQIAGGTIMALHGAQGPQTGLPQMILSRVQFGIYGAIIPLALVCVMYIGFLT HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTVLMSQALGQLMHVSPAQAIVMLGVVVTLLALFGYRAIHAVGRIYSVVGGLMFVYLLF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLTRGHNATLLFDNRHFTWPTFLFAVSLSASWQITYGPYVADYSRYLPRATSPLRTFLTI HHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHH GAGSVLGSQIAMTFGVFAAALAGKQFAGHEVAYMVGIGSGGIALVATTLYLTIMFGKLIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH STLCVYGGFMSVATISAALRGKPSIGLGARIVLTIGVVATYTILALVADHAFLRTFSHFI HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLLAFFTPWSAINLVDYYWVSHEPIDVSALSDVNGRYGKWNAIGITCYVVGVLAQIPFM HHHHHHHCCCCHHHHHHEEEECCCCCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCC STELYTGPLFNLLGGIDVSWIVGMVLPGALYYALTRHRSPRASRHAQIDRA CCHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]