Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78044586

Identifier: 78044586

GI number: 78044586

Start: 1099095

End: 1099763

Strand: Direct

Name: 78044586

Synonym: CHY_1232

Alternate gene names: NA

Gene position: 1099095-1099763 (Clockwise)

Preceding gene: 78043653

Following gene: 78044792

Centisome position: 45.77

GC content: 44.69

Gene sequence:

>669_bases
TTGATTGTTGCTGAAAGAAAACCGCTCGAAGAAATAATTAAGATGGTGGAAAAGCATGAAAGTATTTTAGTCTTGGGATG
CGGCGGTTGCGTTACGGTATGTTTAGCCGGGGGTGAGAAAGAAGCAGAACAGCTCGCTACGACCCTGCGGCTTTACTTCC
AAAAAGAAAACAAACCGTTTAAAACTATTACCACCACTATTACCCGGCAGTGCGATCCAGAATATGTTAAGTCCGTTGCG
GAAGAAGTTGCCAAAGTCGATGCTGTTTTATCAACCGCTTGCGGTGTCGGAGTTCAATTTATGGCCGAGAACTATCCTGG
TAAATGGGTTTATCCTGCTCTAAATACAAAGTTTGCTGGAGCAAATTTAGAGTTGGGAGTTTGGGGAGAAAGATGTGGCC
TTTGCGGAGAATGTATTTTACACCTAACCGGTGGGGTATGTCCGGTAATCCGTTGTTCTAAGAGCTTGTTAAATGGCCCT
TGTGGTGGCTCGCAGAACGGAAAATGCGAGGTTTCCAGTGAAATCGACTGTGCTTGGCAGTTGATTTATGACCGGTTAAA
AAGTTTAAATAGCCTTGACCTAATCCTTAAGATTCAACCACCCAAAGATTGGTCTAAAGCCCGGGATGGTGGTCCCAGGA
AAGTAATTAAGGAGGAGGTCCGGTTATGA

Upstream 100 bases:

>100_bases
GAGCAACAATTGCTTTTTACGGCTTAAAGCCGGGAGATGTTGATAGTCTGAAAAACATCTTAAGTACGATTTAATTACCT
GAGGAAAGGGTGACCAAACC

Downstream 100 bases:

>100_bases
TAACGGAAAGCCGCCTGGAAAAATTATTTGCCGAAGGTCATTTTGTGGTTACGGCAGAAATTGGACCTCCCAAAAACAGT
AACGGAGAAGTAGTACGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA
EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP
CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL

Sequences:

>Translated_222_residues
MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA
EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP
CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL
>Mature_222_residues
MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPFKTITTTITRQCDPEYVKSVA
EEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAGANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGP
CGGSQNGKCEVSSEIDCAWQLIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24293; Mature: 24293

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPF
CCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCH
KTITTTITRQCDPEYVKSVAEEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCCEECC
ANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGPCGGSQNGKCEVSSEIDCAWQ
CCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH
LIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL
HHHHHHHCCCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIVAERKPLEEIIKMVEKHESILVLGCGGCVTVCLAGGEKEAEQLATTLRLYFQKENKPF
CCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCH
KTITTTITRQCDPEYVKSVAEEVAKVDAVLSTACGVGVQFMAENYPGKWVYPALNTKFAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCCEECC
ANLELGVWGERCGLCGECILHLTGGVCPVIRCSKSLLNGPCGGSQNGKCEVSSEIDCAWQ
CCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH
LIYDRLKSLNSLDLILKIQPPKDWSKARDGGPRKVIKEEVRL
HHHHHHHCCCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA